Difference between revisions of "PAG 2009"
From GMOD
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! [http://www.intl-pag.org/17/17-aqua.html Aquaculture Workshop] | ! [http://www.intl-pag.org/17/17-aqua.html Aquaculture Workshop] | ||
! 4:20-4:40 | ! 4:20-4:40 | ||
− | | [http://www.intl-pag.org/17/abstracts/W04_Workshop_025.html A Review Of The Marine Genomics Project, A Web-Based Genomic And Transcriptional Database], Stephen P Ficklin, ''et al.'' | + | | [http://www.intl-pag.org/17/abstracts/W04_Workshop_025.html A Review Of The Marine Genomics Project, A Web-Based Genomic And Transcriptional Database], Stephen P Ficklin, ''et al.'' |
| [[Chado]], [[GBrowse]] | | [[Chado]], [[GBrowse]] | ||
|- | |- | ||
! rowspan="1" | Sunday<br />Jan 11 | ! rowspan="1" | Sunday<br />Jan 11 | ||
− | ! [http://www.intl-pag.org/17/17-demos.html Computer | + | ! [http://www.intl-pag.org/17/17-demos.html Computer Demo] |
! 4:50-5:10 | ! 4:50-5:10 | ||
| The [http://rapdb.dna.affrc.go.jp/ Rice Annotation Project Database (RAP-DB)]: Introduction to the Comparative Analysis between Rice and Other Plant Species, [mailto:hirsakai@affrc.go.jp Hiroaki Sakai], ''et al''. | | The [http://rapdb.dna.affrc.go.jp/ Rice Annotation Project Database (RAP-DB)]: Introduction to the Comparative Analysis between Rice and Other Plant Species, [mailto:hirsakai@affrc.go.jp Hiroaki Sakai], ''et al''. | ||
| [[GBrowse]] | | [[GBrowse]] | ||
|- | |- | ||
− | ! rowspan=" | + | ! rowspan="9" | Monday<br />Jan 12 |
! rowspan="2" | Odd Numbered Poster Session | ! rowspan="2" | Odd Numbered Poster Session | ||
! rowspan="2" | 10:00-11:30 | ! rowspan="2" | 10:00-11:30 | ||
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| [[Apollo]], [[Chado]], [[GBrowse]] | | [[Apollo]], [[Chado]], [[GBrowse]] | ||
|- | |- | ||
− | ! rowspan="5" | [http://www.intl-pag.org/17/17-demos.html Computer | + | ! rowspan="5" | [http://www.intl-pag.org/17/17-demos.html Computer Demo] |
! 1:30-1:50 | ! 1:30-1:50 | ||
| [http://www.cottondb.org CottonDB]: A Resource for Cotton Genome Research, [mailto:jingyu@tamu.edu Jing Yu], ''et al''. | | [http://www.cottondb.org CottonDB]: A Resource for Cotton Genome Research, [mailto:jingyu@tamu.edu Jing Yu], ''et al''. | ||
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| [[CMap]] | | [[CMap]] | ||
|- | |- | ||
− | ! Even Numbered Poster Session | + | ! rowspan="2" | Even Numbered Poster Session |
− | ! 3:00-4:30 | + | ! rowspan="2" | 3:00-4:30 |
| [http://www.intl-pag.org/17/abstracts/P05f_Poster_364.html P364: SoyBase And The Soybean Breeder’S Toolbox: Updated Features And New Data], David Grant, Rex T. Nelson, Steven B. Cannon, Randy C. Shoemaker | | [http://www.intl-pag.org/17/abstracts/P05f_Poster_364.html P364: SoyBase And The Soybean Breeder’S Toolbox: Updated Features And New Data], David Grant, Rex T. Nelson, Steven B. Cannon, Randy C. Shoemaker | ||
| [[CMap]], [[GBrowse]] | | [[CMap]], [[GBrowse]] | ||
+ | |- | ||
+ | | [http://www.intl-pag.org/17/abstracts/P08a_Poster_796.html P796: The Hymenoptera Genome Database], Justin T. Reese, ''et al.'' | ||
+ | | [[Apollo]] | ||
|- | |- | ||
! Tuesday<br />Jan 13 | ! Tuesday<br />Jan 13 | ||
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|- | |- | ||
! rowspan="2" | Wednesday<br />Jan 14 | ! rowspan="2" | Wednesday<br />Jan 14 | ||
− | ! rowspan="2" | [http://www.intl-pag.org/17/17-demos.html Computer | + | ! rowspan="2" | [http://www.intl-pag.org/17/17-demos.html Computer Demo] |
! 2:20-2:40 | ! 2:20-2:40 | ||
| Structural and Functional Annotation of Wheat and Barley Genome Sequences with [http://urgi.versailles.inra.fr/projects/TriAnnot/ TriAnnot Pipeline], [mailto:leroy@clermont.inra.fr Philippe Leroy] ''et al''. | | Structural and Functional Annotation of Wheat and Barley Genome Sequences with [http://urgi.versailles.inra.fr/projects/TriAnnot/ TriAnnot Pipeline], [mailto:leroy@clermont.inra.fr Philippe Leroy] ''et al''. |
Revision as of 21:18, 19 December 2008
{{#icon: Paglogo.gif|PAG 2009 Conference||http://www.intl-pag.org/}}
GMOD will again have a strong presence at the Plant and Animal Genome Conference (PAG 2009). PAG is also immediately before the January 2009 GMOD Meeting and many GMOD members will likely attend both meetings.
There will be several workshops and computer demos, either about or using GMOD Components:
About GMOD Components
Projects Using GMOD Components
Day | Track | Time | Title & Author | Components |
---|---|---|---|---|
Saturday Jan 10 |
Aquaculture Workshop | 4:20-4:40 | A Review Of The Marine Genomics Project, A Web-Based Genomic And Transcriptional Database, Stephen P Ficklin, et al. | Chado, GBrowse |
Sunday Jan 11 |
Computer Demo | 4:50-5:10 | The Rice Annotation Project Database (RAP-DB): Introduction to the Comparative Analysis between Rice and Other Plant Species, Hiroaki Sakai, et al. | GBrowse |
Monday Jan 12 |
Odd Numbered Poster Session | 10:00-11:30 | P783: The Bovine Genome Database, Christopher P. Childers, et al. | Apollo, chado, GBrowse |
P785: The URGI Bioinformatics Platform: Focus On Genomic Annotation Databases And Tools, Michael Alaux, et al. | Apollo, Chado, GBrowse | |||
Computer Demo | 1:30-1:50 | CottonDB: A Resource for Cotton Genome Research, Jing Yu, et al. | CMap | |
1:50-2:10 | Updates to SoyGD: Genome Sequence Search Tools and a Predicted Interactome, David Lightfoot, et al. | GBrowse | ||
2:10-2:30 | The Legume Information System (LIS): An Integrated, Dynamic Comparative Legume Information Resource, Gregory May et al. | CMap | ||
2:10-2:30 | The MaizeGDB Genome Browser, Taner Sen et al. | GBrowse | ||
2:30-2:50 | TreeGenes: A Forest Tree Genome Database, Jill Wegrzyn et al. | CMap | ||
Even Numbered Poster Session | 3:00-4:30 | P364: SoyBase And The Soybean Breeder’S Toolbox: Updated Features And New Data, David Grant, Rex T. Nelson, Steven B. Cannon, Randy C. Shoemaker | CMap, GBrowse | |
P796: The Hymenoptera Genome Database, Justin T. Reese, et al. | Apollo | |||
Tuesday Jan 13 |
Computer & Training Workshop | 3:50-6:00 | Using Gramene: A Genomics and Genetics Resource for Rice and other Grasses., Claire Hebbard, and Immanuel Yap | CMap |
Wednesday Jan 14 |
Computer Demo | 2:20-2:40 | Structural and Functional Annotation of Wheat and Barley Genome Sequences with TriAnnot Pipeline, Philippe Leroy et al. | Apollo (under consideration), GBrowse |
2:40-3:00 | GnpIS, The Plant Information System of INRA URGI Bioinformatic Platform, Delphine Steinbach et al. | Apollo, Chado, CMap, GBrowse |
Posters with GMOD Components
Title & Author | Components |
---|---|
Integrated Genome Informatics - Current Approaches and Platforms in a Rapidly Changing Environment, Russell Smithies | GBrowse |