GO Graphic Viewer

Status

• Mature release
• Development: inactive
• Support: active

Resources

• Home page
• Download

About GO Graphic Viewer

The GO Graphic Viewer module (Bio::GMOD::GO::View) generates a graphic that displays the parent and child relationships of a selected GO term. It also provides the visualization for the results from the GO::TermFinder Perl module created by the Stanford Microarray Database (SMD). This module is useful when analyzing experimental or computational results that produce a set of gene products that may have common function or process annotations. This distribution also includes two examples of its use in Web-based user interfaces (goView.pl and goTermFinder.pl).

Visit the GO Graphic Viewer website.

Downloads

• Download GO Graphic Viewer: http://sourceforge.net/projects/gmod/files/GOView/

Using GO Graphic Viewer

System Requirements

• The Apache web server
• Perl 5.005 or higher
• GD
• CGI
• GraphViz
• GO::TermFinder
• Bioperl

Documentation

Documentation is provided in the README file in the GO Graphic Viewer download package.

Contacts and Mailing Lists

For support, please contact the GO Graphic Viewer developer, Shuai Weng.

GO Graphic Viewer Development

Development team

Gavin Sherlock, Stanford University

More on GO Graphic Viewer

Raw tool data at GO Graphic Viewer/tool data