User contributions
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- 19:35, 14 February 2007 (diff | hist) . . (+337) . . Nm Chado Stock Module (New page: ==Introduction=== ==Tables== ===stock=== ===stock_pub=== ===stockprop=== ===stockprop_pub=== ===stock_relationship=== ===stock_relationship_pub=== ===stock_dbxref=== ===stock_c...)
- 19:31, 14 February 2007 (diff | hist) . . (+2,874) . . Nm Chado Publication Module (New page: ==Introduction== ==Tables== ===pub=== A documented provenance artefact - publications, documents, personal communication Field Name Data Type Size Default Value Other Foreign Ke...)
- 19:26, 14 February 2007 (diff | hist) . . (+5,256) . . Nm Chado Phylogeny Module (New page: ==Introduction== nested set tree implementation by way of Joe Celko; see the excellent intro by Aaron Mackey here http://www.oreillynet.com/pub/a/network/2002/11/27/bioconf.html For ...)
- 19:18, 14 February 2007 (diff | hist) . . (+2,231) . . Nm Chado Organism Module (New page: ==Introduction== ==Tables== ===organism=== The organismal taxonomic classification. Note that phylogenies are represented using the phylogeny module, and taxonomies can be represented...)
- 19:14, 14 February 2007 (diff | hist) . . (+55) . . m Chado Manual (→A Feature is a Sequence)
- 19:06, 14 February 2007 (diff | hist) . . (-1) . . m Chado Library Module
- 19:02, 14 February 2007 (diff | hist) . . (+2,992) . . Nm Chado Library Module (New page: ==Introduction== ==Tables== ===library=== Field Name Data Type Size Default Value Other Foreign Key library_id integer 11 PRIMARY KEY, NOT NULL organism_id integer 10 UNIQUE, ...)
- 18:26, 14 February 2007 (diff | hist) . . (+39) . . m Chado Contact Module
- 18:26, 14 February 2007 (diff | hist) . . (+1,180) . . Nm Chado Contact Module (New page: ==Introduction== ==Tables== ===contact=== model persons, institutes, groups, organizations, etc Field Name Data Type Size Default Value Other Foreign Key contact_id integer 11 ...)
- 18:23, 14 February 2007 (diff | hist) . . (+4,992) . . Nm Chado Companalysis Module (New page: ==Introduction== ==Tables== ===analysis=== An analysis is a particular type of a computational analysis; it may be a blast of one sequence against another, or an all by all blast, ...)
- 18:17, 14 February 2007 (diff | hist) . . (+4,113) . . Nm Chado Audit Module (New page: ==Introduction== The Audit module is not a module in the same sense as the other Chado modules. It is a set of recommendations on how one might implement auditing in Chado. This document...)
- 18:08, 14 February 2007 (diff | hist) . . (+667) . . m Chado Genetic Module
- 18:08, 14 February 2007 (diff | hist) . . (-669) . . m Chado Sequence Module
- 18:03, 14 February 2007 (diff | hist) . . (+1,189) . . Nm Chado Genetic Module (New page: ==Introduction== ==Tables== ===phenstatement=== Phenotypes are things like ”larval lethal”. Phenstatements are things like ”dpp[1] is recessive larval lethal”. So essentially ...)
- 18:02, 14 February 2007 (diff | hist) . . (-1,122) . . m Chado Phenotype Module
- 17:59, 14 February 2007 (diff | hist) . . (+2,188) . . Nm Chado Phenotype Module (New page: ==Introduction== ==Tables== ===phenstatement=== Phenotypes are things like ”larval lethal”. Phenstatements are things like ”dpp[1] is recessive larval lethal”. So essentially...)
- 17:57, 14 February 2007 (diff | hist) . . (-2,117) . . m Chado Sequence Module
- 17:55, 14 February 2007 (diff | hist) . . (+901) . . Nm Chado Map Module (New page: ==Introduction== ==Tables== ===featuremap=== NOTE: this module is all due for revision... Table 4.45: featuremap Column Datatype Description featuremap id integer name var...)
- 17:53, 14 February 2007 (diff | hist) . . (-832) . . m Chado Sequence Module
- 17:39, 14 February 2007 (diff | hist) . . (-18) . . m Chado Sequence Module
- 17:37, 14 February 2007 (diff | hist) . . (-1) . . m Chado Sequence Module (→feature phenotype)
- 17:37, 14 February 2007 (diff | hist) . . (-19,341) . . m Chado Sequence Module
- 17:33, 14 February 2007 (diff | hist) . . (+38) . . m Chado Sequence Module
- 17:29, 14 February 2007 (diff | hist) . . (+82) . . m Chado Sequence Module
- 17:11, 14 February 2007 (diff | hist) . . (+114,824) . . Nm Chado Sequence Module (New page: Chapter 4 The Sequence Module: Features 4.1 The role of features in Chado The central module in Chado is the sequence module. The fundamental table within this module is the feature...)
- 17:05, 14 February 2007 (diff | hist) . . (+23,986) . . m Chado CV Module
- 17:03, 14 February 2007 (diff | hist) . . (+8,168) . . Nm Chado General Module (New page: ==Introduction== General purpose tables are housed in the module general. The primary purpose of this module is to provide a means of providing data entities with stable, unique identi...)
- 17:01, 14 February 2007 (diff | hist) . . (+38) . . m Chado Manual
- 17:00, 14 February 2007 (diff | hist) . . (+51) . . Nm Category:Chado (New page: About Chado, installing Chado, Chado documentation.)
- 16:59, 14 February 2007 (diff | hist) . . (+2,082) . . Nm Chado CV Module (New page: ==Introduction== We have seen how the sequence module makes extensive use of terms taken from various ontologies such as SO and the OBO Relations Ontology, using the type_id foreign key ...)
- 16:46, 14 February 2007 (diff | hist) . . (+1,487) . . m Chado Manual (→Naming Conventions)
- 16:42, 14 February 2007 (diff | hist) . . (+123) . . m Chado Manual (→Inter-module Linking Tables)
- 16:34, 14 February 2007 (diff | hist) . . (+715) . . m Chado Manual (→Modules)
- 16:27, 14 February 2007 (diff | hist) . . (+5,347) . . Nm Chado Manual (New page: ==Introduction== ===A Feature is a Sequence=== Chado does not distinguish between a sequence and a sequence feature, on the theory that a feature is a piece of a sequence, and a piece o...)
- 16:19, 14 February 2007 (diff | hist) . . (+5) . . m Chado - Getting Started (→Installation using an RPM)
- 16:19, 14 February 2007 (diff | hist) . . (+20) . . m GMOD - Getting Started (→Installation)
- 16:16, 14 February 2007 (diff | hist) . . (+19) . . m GMOD Developer's Guide
- 16:11, 14 February 2007 (diff | hist) . . (+1) . . m GMOD - Getting Started (→Contacts)
- 15:53, 14 February 2007 (diff | hist) . . (+1) . . m Community
- 15:52, 14 February 2007 (diff | hist) . . (+44) . . m GMOD Components
- 15:51, 14 February 2007 (diff | hist) . . (+243) . . m GMOD Components
- 15:21, 14 February 2007 (diff | hist) . . (+24) . . m GMOD Components
- 15:19, 14 February 2007 (diff | hist) . . (-2) . . m Org.bdgp
- 15:19, 14 February 2007 (diff | hist) . . (-34) . . m Org.bdgp
- 15:14, 14 February 2007 (diff | hist) . . (+21) . . m GMOD Components
- 15:13, 14 February 2007 (diff | hist) . . (+18) . . m GMOD Components
- 15:00, 14 February 2007 (diff | hist) . . (+234) . . m GMOD Components
- 14:18, 14 February 2007 (diff | hist) . . (+6) . . m GMOD Components
- 04:36, 14 February 2007 (diff | hist) . . (-2) . . m GMOD Components
- 04:35, 14 February 2007 (diff | hist) . . (+130) . . m GMOD Components
- 04:32, 14 February 2007 (diff | hist) . . (0) . . m LuceGene (LuceGene: Document/Object Search and Retrieval moved to LuceGene: Better title)
- 04:31, 14 February 2007 (diff | hist) . . (-47) . . m GMOD Components
- 04:31, 14 February 2007 (diff | hist) . . (0) . . m JavaSEAN (JavaSean - java based SEquence ANnotation tool moved to JavaSEAN: Better title)
- 04:31, 14 February 2007 (diff | hist) . . (+22) . . N JavaSean - java based SEquence ANnotation tool (JavaSean - java based SEquence ANnotation tool moved to JavaSEAN: Better title) (current)
- 04:30, 14 February 2007 (diff | hist) . . (+11) . . m GMOD Components
- 04:29, 14 February 2007 (diff | hist) . . (+185) . . m GMOD Components
- 04:23, 14 February 2007 (diff | hist) . . (-18) . . m Bioperl Pipeline
- 04:08, 14 February 2007 (diff | hist) . . (+4) . . m Chado - Getting Started
- 04:08, 14 February 2007 (diff | hist) . . (+29) . . m Chado - Getting Started (→Chado From CVS)
- 04:06, 14 February 2007 (diff | hist) . . (0) . . m Chado - Getting Started (→Description)
- 04:05, 14 February 2007 (diff | hist) . . (+19) . . m Chado - Getting Started (→Download Chado)
- 04:05, 14 February 2007 (diff | hist) . . (+111) . . m Chado - Getting Started (→Chado From CVS)
- 04:04, 14 February 2007 (diff | hist) . . (+70) . . m Chado - Getting Started (→Installation using an RPM)
- 04:01, 14 February 2007 (diff | hist) . . (+15) . . m GBrowse
- 03:58, 14 February 2007 (diff | hist) . . (+13) . . m GBrowse (→Documentation)
- 03:55, 14 February 2007 (diff | hist) . . (+2) . . m GBrowse
- 03:54, 14 February 2007 (diff | hist) . . (-5) . . m GBrowse (→Installation)
- 03:54, 14 February 2007 (diff | hist) . . (-55) . . m GBrowse (→Installation)
- 03:50, 14 February 2007 (diff | hist) . . (-69) . . m Chado - Getting Started
- 03:46, 14 February 2007 (diff | hist) . . (-6) . . m GMOD Components
- 02:58, 14 February 2007 (diff | hist) . . (-721) . . m GMOD Components
- 02:47, 14 February 2007 (diff | hist) . . (-45) . . m GMOD Components
- 02:46, 14 February 2007 (diff | hist) . . (+1) . . m Apollo
- 02:45, 14 February 2007 (diff | hist) . . (+46) . . m Apollo (→Description)
- 02:43, 14 February 2007 (diff | hist) . . (-6) . . m Apollo
- 02:42, 14 February 2007 (diff | hist) . . (+4) . . m Apollo-Chado example database
- 02:42, 14 February 2007 (diff | hist) . . (+11) . . m Apollo-Chado example database
- 02:41, 14 February 2007 (diff | hist) . . (-18) . . m Apollo-Chado example database
- 02:39, 14 February 2007 (diff | hist) . . (+1) . . m Chado - Getting Started
- 02:38, 14 February 2007 (diff | hist) . . (+36) . . m Chado - Getting Started (→Contacts)
- 02:36, 14 February 2007 (diff | hist) . . (+1) . . m Chado - Getting Started
- 02:36, 14 February 2007 (diff | hist) . . (+2) . . m Chado - Getting Started
- 02:35, 14 February 2007 (diff | hist) . . (+171) . . m Chado - Getting Started (→Download Chado)
- 22:17, 13 February 2007 (diff | hist) . . (+1) . . m Chado - Getting Started (→=Download Chado)
- 22:17, 13 February 2007 (diff | hist) . . (-290) . . m Chado - Getting Started (→Chado From CVS)
- 22:05, 13 February 2007 (diff | hist) . . (+3) . . m Chado - Getting Started
- 22:03, 13 February 2007 (diff | hist) . . (+1) . . m Chado - Getting Started (→Installation using an RPM)
- 21:51, 13 February 2007 (diff | hist) . . (+54) . . m Chado - Getting Started (→Documentation)
- 21:49, 13 February 2007 (diff | hist) . . (+29) . . m GMOD - Getting Started (→Contacts)
- 21:48, 13 February 2007 (diff | hist) . . (+29) . . m GMOD Help Desk (→Contact)
- 21:46, 13 February 2007 (diff | hist) . . (+890) . . Nm GMOD Help Desk (New page: ==About== The GMOD Help Desk is a new collaboration between GMOD and [http://www.nescent.org NESCent] that will promote the use of GMOD amongst evolutionary biologists. One goal of this c...)
- 21:38, 13 February 2007 (diff | hist) . . (+8) . . m GMOD - Getting Started (→Description)
- 21:37, 13 February 2007 (diff | hist) . . (-20) . . m GMOD - Getting Started
- 21:30, 13 February 2007 (diff | hist) . . (+20) . . Nm Overview (New page: ==What is a GMOD?==)
- 21:10, 13 February 2007 (diff | hist) . . (0) . . m GMOD - Getting Started (Getting Started with Chado and GMOD moved to GMOD - Getting Started: Not about Chado, just GMOD)
- 20:51, 13 February 2007 (diff | hist) . . (+350) . . m Chado - Getting Started (→Installation using an RPM)
- 20:46, 13 February 2007 (diff | hist) . . (+36) . . m Chado - Getting Started (→Chado From CVS)
- 20:44, 13 February 2007 (diff | hist) . . (+1) . . m Chado - Getting Started
- 20:42, 13 February 2007 (diff | hist) . . (+688) . . m Chado - Getting Started (→=Chado From CVS)
- 20:32, 13 February 2007 (diff | hist) . . (+1) . . m XORT
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