NOTE: We are working on migrating this site away from MediaWiki, so editing pages will be disabled for now.
Difference between revisions of "BLAST Graphic Viewer/tool data"
(Created page with "{{ {{{template}}} | name = blastGraphic | full_name = BLAST Graphic Viewer | status = mature | dev = inactive | support = active | type = Sequence Alignment | os_web = y | log...") |
m |
||
| Line 1: | Line 1: | ||
{{ {{{template}}} | {{ {{{template}}} | ||
| − | | name = | + | | name = BLAST Graphic Viewer |
| − | | full_name = | + | | full_name = |
| status = mature | | status = mature | ||
| dev = inactive | | dev = inactive | ||
| Line 9: | Line 9: | ||
| logo = | | logo = | ||
| home = http://www.yeastgenome.org/cgi-bin/blast-sgd.pl | | home = http://www.yeastgenome.org/cgi-bin/blast-sgd.pl | ||
| − | | about = BLAST Graphic Viewer provides a graphical visualization of the regions contained within HSPs relative to the query sequence. | + | | about = BLAST Graphic Viewer provides a graphical visualization of the regions contained within HSPs relative to the query sequence. BLAST Graphic Viewer is also known as blastGraphic. |
| screenshot = | | screenshot = | ||
| public_server = | | public_server = | ||
| Line 24: | Line 24: | ||
*Perl modules from CPAN: {{CPAN|Bio::GMOD::Blast::Graph}}, Bio::Perl | *Perl modules from CPAN: {{CPAN|Bio::GMOD::Blast::Graph}}, Bio::Perl | ||
*BLAST or BLAT applications | *BLAST or BLAT applications | ||
| − | + | | install = See the INSTALL file in the [http://sourceforge.net/projects/gmod/files/blastGraphic/ blastGraphic download] for full details. | |
| − | See the INSTALL file in the download for full details. | + | |
| − | + | ||
| config = | | config = | ||
| doc = | | doc = | ||
| Line 35: | Line 33: | ||
| mail = | | mail = | ||
| logo_info = | | logo_info = | ||
| − | | dev_ppl = | + | | dev_ppl = |
| − | | dev_status = | + | | dev_status = |
| contact_email = [sweng@stanford.edu Shuai Weng] | | contact_email = [sweng@stanford.edu Shuai Weng] | ||
| input = <!-- input formats --> | | input = <!-- input formats --> | ||
Revision as of 00:04, 18 December 2012
{{ {{{template}}} | name = BLAST Graphic Viewer | full_name = | status = mature | dev = inactive | support = active | type = Sequence Alignment | os_web = y | logo = | home = http://www.yeastgenome.org/cgi-bin/blast-sgd.pl | about = BLAST Graphic Viewer provides a graphical visualization of the regions contained within HSPs relative to the query sequence. BLAST Graphic Viewer is also known as blastGraphic. | screenshot = | public_server = | dl = | dl_url = http://sourceforge.net/projects/gmod/files/blastGraphic/ | dl_src = | dl_src_url = | dl_dev = | dl_dev_url = | getting_started_preamble = | req =
- Apache web server
- Perl 5.005 or higher
- Perl modules from CPAN: Bio::GMOD::Blast::Graph, Bio::Perl
- BLAST or BLAT applications
| install = See the INSTALL file in the blastGraphic download for full details. | config = | doc = | papers = | presentations = | tutorials = | wild_urls = | mail = | logo_info = | dev_ppl = | dev_status = | contact_email = [sweng@stanford.edu Shuai Weng] | input = | output = | see_also = | demo_server = | survey_link = }}
