User talk:Girlwithglasses

http://agripestbase.org	Agripestbase	Agricultural pests		2013
http://agripestbase.org/hessianfly	Hessian fly	part of Agripestbase		2013
http://agripestbase.org/manduca	Manduca sexta	part of Agripestbase		2013
http://amoebadb.org	AmoebaDB	Amoeba (part of EupathDB)		2013
http://aphidbase.com/	AphidBase	Pea aphid genome	Yes	200x	+www
http://arabidopsis.org	TAIR			200x	+www
http://arpcard.mcmaster.ca/	The Comprehensive Antibiotic Resistance Database		Yes	200x
http://atidb.org	ATIDB	Arabidopsis		200x
http://banana-genome.cirad.fr/	Banana Genome Hub		Tripal	2013
http://beetlebase.org/	BeetleBase	Tribolium castaneum Gbrowse, JBrowse	Yes	2013
http://biocomp.dfci.harvard.edu/tgi/	TGI	The Gene Index Project		200x
http://biohealthbase.org/GSearch/	BioHealthBase	BioDefense Public Health Database		200x	+www
http://bioinf.scri.sari.ac.uk/	SCRI Plant Bioinformatics Group		Yes	200x
http://bioinfo.ccbusm.edu.my/cgi-bin/gb2/gbrowse/Rubber/	Rubber Genome Browser			200x
http://bovinegenome.org/	BGD	Bovine Genome Database		200x
http://bovineqtl.tamu.edu	Bovine QTL Viewer			200x
http://cacaogenomedb.org	Cacao Genome Database	Cacao	Tripal	2013	+www
http://candidagenome.org/cgi-bin/gbrowse/candida_20/	CGD	Candida Genome Database		200x	+www
http://chr7.org/cgi-bin/gbrowse/gbrowse/chr7_v2/	Chromosome 7 Annotation Project			200x	+www
http://chromdb.org/	ChromDB	Plant Chromatin Database		200x	+www
http://ciliate.org/	TGD	Tetrahymena Genome Database		2013	+www
http://citrusgenomedb.org	Citrus Genome Database	Citrus	Tripal	2013	+www
http://citrusgreening.org/	Citrus Greening	pathogens causing citrus greening (Huanglongbing or HLB), esp. Liberibacter		2013
http://coccidia.icb.usp.br/eimeriatdb/	Eimeria transcript database	Annotated transcripts of protozoan parasites of the genus Eimeria		2013	+www
http://comparative-legumes.org/	LIS	Legume Information System		2013	+www
http://cosmoss.org	cosmoss.org	The Bryophyte Genomics Resource - Physcomitrella patens Annotation		200x	+www
http://cottongen.org/	Cottongen		Tripal	2013	+www
http://crfb.univ-mrs.fr/ciona-bin/gbrowse/intestinalis/	ANISEED	Ascidian Network for In Situ Expression and Embryological Data		200x
http://cryptodb.org	CryptoDB	Cryptosporidium (part of EupathDB)	GBrowse, Cyc	2013
http://db.yeastgenome.org/cgi-bin/gbrowse/scgenome/	SGD			200x
http://db.yeastgenome.org/cgi-bin/gbrowse/scproteome/	S. cerevisiae Proteome Browser			200x
http://dictybase.org	DictyBase		Yes	200x	+www
http://ecocyc.org/	EcoCyc			200x
http://eqtl.uchicago.edu/cgi-bin/gbrowse/eqtl/	eQTL browser	eQTLs identified in recent studies in multiple tissues @ Pritchard lab, UChicago		2013
http://equinegenome.org/	Equine Genome	Equus caballus		200x	+www
http://eupathdb.org	EupathDB	Eukaryotic pathogens, including Babesia, Crithidia, Cryptosporidium, Edhazardia, Eimeria, Encephalitozoon, Endotrypanum, Entamoeba, Enterocytozoon, Giardia, Gregarina, Hamiltosporidium, Leishmania, Nematocida, Neospora, Nosema, Plasmodium, Theileria, Toxoplasma, Trichomonas, Trypanosoma, and Vivraia		2013
http://fagaceae.org	Fagaceae Genomics Web	Fagaceae spp, including oak, beech, chestnut, etc.	Tripal	2013
http://flybase.org	FlyBase	A Database of Drosophila Genes & Genomes	Yes	2013	+www
http://fungal.genome.duke.edu/	Fungal Comparitive Genomics			200x
http://fungus.kbrin.uky.edu/cgi-bin/gbrowse/A_fumigatus_tigr_tel_100k	A. fumigatus TIGR/Sanger Assembly			200x
http://gabcsfl.org	Cool Season Food Legume Database	Cool season legumes, e.g. pea, lentil, chickpea, fava beans, etc.	Tripal	2013
http://genedb.org	GeneDB	Pathogen Sequenceing Unit	Yes	200x	+www
http://genetics.ucla.edu/labs/nelson/	???	Microarray data, Chado, H. sapiens	Yes	200x
http://genome.kbrin.uky.edu/fungi_tel/browser.html	Fungal Telomere Browser			200x
http://genome.ucsc.edu/cgi-bin/hgGateway?org=Chicken	Gallus Genome Browser			200x
http://giardiadb.org	GiardiaDB	Giardia (part of EupathDB)		2013
http://gmod.mbl.edu/	JBPC Generic Model Organism Database servers	Huge set of GMOD/GBrowse resources covering many different species		2013
http://gramene.org	Gramene			2013	+www
http://hapmap.org/cgi-perl/gbrowse/	HapMap			200x	+www
http://hardwoodgenomics.org	Hardwood Genomics Project	Hardwood tree spp	Tripal	2013	+www
http://hcgs.unh.edu/gbrowse/	UNH HCGS Tetraodon Genome Browser	Gbrowse plus GFF		200x
http://hgdp.uchicago.edu/cgi-bin/gbrowse/HGDP/	Human Genome Diversity Project	HGDP @ Pritchard lab, UChicago		2013
http://huref.jcvi.org/browse.html	JCVI	J. Craig Venter Institute	Yes	200x
http://hymenopteragenome.org/beebase/	BeeBase			2013
http://ich.ciliate.org/	IchDB	Ichthyophthirius multifiliis genome		2013
http://influenza.genomics.org.cn/	IVDB	Influenza Virus Database		200x
http://informatics.jax.org/	MGI			200x	+www
http://inra.fr/lepidodb	Lepido dB	Lepidoptera database; covers Helicoverpa armigera and Spodoptera frugiperda		2012	+www
http://insects.eugenes.org/DroSpeGe/	DroSpeGe			200x
http://irfgc.irri.org/cgi-bin/gbrowse	OryzaSNP			200x
http://jcvi.org	TIGR	The Institute for Genomic Research	Yes	200x	+www
http://knowpulse2.usask.ca/portal/	KnowPulse: Pulse Crop Genomics & Breeding	Chickpea, lentil, common bean, pea	Tripal	2013
http://livestockgenomics.csiro.au/	Livestock Genomics	CSIRO Livestock Industries (LI) livestock genomics; covers bovines and ovines		2013	+www
http://magi.plantgenomics.iastate.edu/	MAGI	Maize Assembled Genomic Island		200x
http://maizeapache.ddpsc.org/cgi-bin/gbrowse.cgi?source=01_azm2bac	AZM-to-BAC Viewer			200x
http://maizeapache.ddpsc.org/cgi-bin/gbrowse.cgi?source=02_azm2gene	AZM-to-Gene Viewer			200x
http://map.lab.nig.ac.jp/cgi-bin/gbrowse/Oryza_chr8/	Oryza Chromosome 8			200x
http://marinegenomics.org	Marine Genomics	Multispecies marine organism database	Tripal	2013	+www
http://me.lzu.edu.cn/yak/	Yak Genome Database	Yak genome		2013
http://microsporidiadb.org	MicrosporidiaDB	Microsporidia (part of EupathDB)		2013
http://mips.gsf.de/cgi-bin/proj/plant/gbrowse/synbrowse	PlantsDB	MIPS PlantsDB		200x
http://nypg.bio.nyu.edu/vicogenta/	Vicogenta	Viewer for Comparing Genomes to Arabidopsis		200x
http://omap.org/	OMAP	Oryza Map Alignment Project		200x	+www
http://orygenesdb.cirad.fr/	OryGenesDB			200x
http://paramecium.cgm.cnrs-gif.fr/	ParameciumDB		Yes	200x
http://patricbrc.org	PATRIC	Pathosystems Resource Integration Center	JBrowse	2013
http://peanutgenetics.tamu.edu/cmap/	PeanutMap			200x
http://piroplasmadb.org	PiroplasmaDB	Piroplasma (part of EupathDB)		2013
http://plasmodb.org	PlasmoDB	Plasmodium (part of EupathDB)		2013
http://popgenie.org/	PopGenIE	The Populus Genome Integrative Explorer		200x
http://possumbase.org.nz/cgi-bin/gbrowse/mondom4/	PossumBase			200x	+www
http://projects.tcag.ca/cgi-bin/duplication/dupbrowse/human_b36	Human Genome Segmental Duplication Database			200x
http://projects.tcag.ca/variation/cgi-bin/gbrowse/hg17	Database of Genomic Variants			200x
http://projects.tcag.ca/xenodup/gbrowse.php	Non-Human Segmental Duplication Database
http://puma.princeton.edu/	PUMAdb	Princeton Microarray Database, Chado		200x
http://racerx00.tamu.edu/cgi-test/searchCattleDatabase.html	Cattle EST Gene Family Database			200x
http://rgd.mcw.edu	RGD	Rat Genome Database		200x
http://rice.plantbiology.msu.edu/cgi-bin/gbrowse/rice	MSU Rice Genome Browser			200x
http://rosaceae.org	Genome Database for Rosaceae	Rosaceae species	Tripal	2013	+www
http://rulai.cshl.edu/cshlmpd/credit.html	CSHLmpd	Mammalian Promoter Database		200x
http://sgdlite.princeton.edu/	SGD Lite			200x
http://smedgd.neuro.utah.edu/	SmedGD	Planaria ESTs	Yes	200x
http://solgenomics.net/	Sol Genomics Network		Yes	200x
http://soybase.org/	SoyBase	USDA Soybean Genetics and Genomics Database	No	200x
http://soybeangenome.siu.edu/	Soybean GBrowse Database			200x
http://spbase.org	SpBase	Genome sequence and annotations produced by the Baylor College of Medicine Human Genome Sequencing Center and the sea urchin research community.		200x
http://t1dbase.cimr.cam.ac.uk/cgi-bin/gbrowse/2q33/	Human 2q33			200x
http://t1dbase.org/cgi-bin/dispatcher.cgi/Welcome/display	T1DBase	Type 1 Diabetes Database		200x
http://tigr.org/tigr-scripts/medicago/gbrowse_bacs.pl	TIGR Medicago BACs			200x	+www
http://toxodb.org	ToxoDB	Toxoplasma (part of EupathDB)		2013
http://treetfdb.bmep.riken.jp/index.pl	TreeTFDB	transcription factors (TF) of papaya (Carica papaya), jatoropha (Jatropha curcas), cassava (Manihot esculenta), poplar (Populus trichocarpa), castor bean (Ricinus communis) and grape vine (Vitis vinifera)		2013
http://trichdb.org	TrichDB	Trichomonas (part of EupathDB)		2013
http://tritrypdb.org	TriTrypDB	Kinetoplastids (part of EupathDB)		2013
http://tropgenedb.cirad.fr/	TropGENE DB	genetic and genomic information about tropical crops studied by Cirad.		200x
http://uclaaccess.ucla.edu/UCLAACCESS/Web/Faculty.aspx?ri=58	???	Trichomona vaginalis	Yes	200x	+www
http://urgi.infobiogen.fr/projects/TriAnnot/GBrowse.php	TriAnnot BAC Viewer			200x
http://v2.pseudomonas.com/whats_new.jsp	PseudoCAP	Pseudomonas Genome Database		200x
http://vaccinium.org/	Genomic DB for Vaccinium	Blueberry, cranberry, lingonberry, other Vaccinium spp.	Tripal	2013	+www
http://vectorbase.org	VectorBase	Chado, DAS, Apollo	Yes	2013	+www
http://wfleabase.org/	wFleaBase	Daphnia	Yes	200x
http://wheat.pw.usda.gov/	GrainGenes			200x
http://wheatgenome.info/	Wheat Genome	Wheat		2013	+www
http://wormbase.org	WormBase			200x	+www
http://xanthusbase.org/	XanthusBase		Yes	200x	+www
http://xenbase.org/	Xenbase			200x	+www
http://xmap.ftdna.com/	Xmap	Human X chromosome map for SNP and STR markers used in genetic genealogy and anthropology	No	2009
http://yandell-lab.org/cgl/	CGL	Comparative Genomics Library		200x	+www
http://ymap.ftdna.com/	Ymap	Human Y chromosome map for SNP and STR markers used in genetic genealogy and anthropology	No	2009