JBrowse Troubleshooting
From GMOD
Revision as of 21:12, 13 April 2012 by RobertBuels (Talk | contribs)
This page collects solutions to problems that people sometimes encounter when installing JBrowse.
Contents
Installing prerequisites
Linux - Ubuntu / Debian
These commands, or similar, should install what you need:
sudo apt-get install build-essential libpng-dev zlib1g-dev libgd2-xpm-dev
Installing prerequisites under Linux - Red Hat / Fedora / CentOS
These commands, or similar, should install what you need:
sudo yum groupinstall "Development Tools" sudo yum install libpng-devel gd-devel zlib-devel perl-ExtUtils-MakeMaker
Mac OS X
Use MacPorts, Fink, Homebrew, or another package manager to install a C++ compiler, libpng development headers, GD development headers, and Zlib development headers.
Failures of setup.sh
setup.sh
creates a log file of debugging information associated with your installation. Email this to entire file to gmod-ajax@lists.sourceforge.net with a request for support.
As more users try setup.sh
and report problems to the mailing list, this wiki will be updated with fixes for common problems they encounter.