Difference between revisions of "JBrowseDev/Current"

From GMOD
Redirect page
Jump to: navigation, search
(Redirected page to JBrowse Configuration Guide)
 
Line 1: Line 1:
This page contains links to documentation pages for the current version of JBrowse (1.2.1).
+
#REDIRECT [[JBrowse Configuration Guide]]
 
+
=Installation=
+
 
+
* [[JBrowseDev/Installation|Installing JBrowse on Mac OS X and Linux]]
+
 
+
=Usage Notes=
+
 
+
* [[JBrowseDev/General Usage|General Usage]], including information about:
+
** [[JBrowseDev/General Usage#User Interface|The JBrowse user interface]]
+
** [[JBrowseDev/General Usage#Reference Sequences|Creating sequence tracks]] (e.g. from FASTA files, or a Chado database)
+
** [[JBrowseDev/General Usage#Feature Tracks|Creating feature tracks]] (e.g. from BED or GFF files, a Chado database, or the UCSC genome browser)
+
** [[JBrowseDev/General Usage#Image Tracks|Creating image tracks]] (e.g. from WIG files)
+
** [[JBrowseDev/General Usage#Searchable Names|Making features searchable by name]]
+
** [[JBrowseDev/General Usage#Removing Tracks|Removing tracks]]
+
 
+
* Additional topics:
+
** [[JBrowseDev/Using Configuration Files With JBrowse|Using Configuration Files]]
+
** [[JBrowseDev/Using a Database With JBrowse|Using a Database]]
+
 
+
=Tutorials=
+
 
+
* [[JBrowse Tutorial|JBrowse Tutorial from the 2010 GMOD Summer School]]
+
* [http://biowiki.org/view/JBrowse/QuickTutorial Quick JBrowse Tutorial from BioWiki]
+
 
+
=See also=
+
 
+
* [[JBrowseDev/Main]]
+
* [[JBrowseDev/Upcoming]]
+
  
 
[[Category:JBrowse]]
 
[[Category:JBrowse]]

Latest revision as of 17:26, 29 March 2013