JBrowse2
From GMOD
Revision as of 22:46, 30 March 2021 by Colin Diesh (Talk | contribs)
Status
- Mature release
- Development: active
- Support: active
Licence
Resources
About JBrowse 2
JBrowse 2 is a multi-modal genome browser that can view data in linear, circular, dotplot, and syntenic modes, in order to better serve the needs of structural variant visualization and comparative genomics. It is coded using React and follows in the footsteps of JBrowse 1 in being highly pluggable. Users can write plugins to create custom data adapters, track types, and even entirely new view types. See https://jbrowse.org/jb2/ for more info
Visit the JBrowse2 website.
Downloads
Contacts and Mailing Lists
Open a discussion or issue on our github page at https://github.com/GMOD/jbrowse-components or log into our chat at https://gitter.im/GMOD/jbrowse2 or send email to gmod-ajax@lists.sourceforge.net
More on JBrowse 2
This page is under active development
Facts about "JBrowse2"RDF feed
Available on platform | web + |
Has URL | https://jbrowse.org/jb2/docs/quickstart_web +, http://jbrowse.org +, http://twitter.com/usejbrowse +, https://github.com/GMOD/jbrowse-components/ + and http://jbrowse.org/demos + |
Has description | JBrowse 2 is a multi-modal genome browser … JBrowse 2 is a multi-modal genome browser that can view data in linear, circular, dotplot, and syntenic modes, in order to better serve the needs of structural variant visualization and comparative genomics. It is coded using React and follows in the footsteps of JBrowse 1 in being highly pluggable. Users can write plugins to create custom data adapters, track types, and even entirely new view types. See https://jbrowse.org/jb2/ for more infoSee https://jbrowse.org/jb2/ for more info + |
Has development status | active + |
Has input format | GFF3 +, Indexed FASTA +, BigWig +, BAM +, CRAM +, VCF/GFF/BED tabixed files +, .hic files + and and more + |
Has licence | Apache 2 + |
Has logo | Jbrowse2_logo.png + |
Has software maturity status | mature + |
Has support status | active + |
Has title | JBrowse demos + |
Has topic | JBrowse2 + |
Is open source | Yes + |
Link type | download +, website +, social media +, source code + and demo server + |
Release date | November 2020 + |
Tool functionality or classification | Genome visualization + |
Written in language | Javascript +, Typescript + and React + |
Has subobjectThis property is a special property in this wiki. | JBrowse2#https://jbrowse.org/jb2/docs/quickstart_web +, JBrowse2#http://jbrowse.org +, JBrowse2#http://twitter.com/usejbrowse +, JBrowse2#https://github.com/GMOD/jbrowse-components/ +, JBrowse2#http://jbrowse.org/demos + and JBrowse2 + |