Difference between revisions of "Chado Natural Diversity Module/natdiv schema changes call"

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(proposed changes)
(Hackathon changes)
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===Hackathon changes===
 
===Hackathon changes===
 
* phenotype
 
* phenotype
* phenotypeprop
+
* phenotypeprop (Can somebody add the reason for adding this table?)
 +
 
 
===Yuri's proposals===
 
===Yuri's proposals===
 
* Add environmentprop.  This is useful when creating phenstatements.
 
* Add environmentprop.  This is useful when creating phenstatements.

Revision as of 17:48, 16 May 2011

call to resolve the latest proposed changes to natdiv module, date TBC

participants

agenda

proposed changes

prop table in genotype module

  • change: addition of (vanilla) prop table to genotype module [cvterm_id, value, rank]
    • proposer: Seth Redmond / Vectorbase
    • reason: enables us to store ontology terms for current genotypes, e.g. presence/absence of specific inversions - impossible under current schema

Hackathon changes

  • phenotype
  • phenotypeprop (Can somebody add the reason for adding this table?)

Yuri's proposals

  • Add environmentprop. This is useful when creating phenstatements.
  • Add phenstatementprop. This is useful when creating phenstatements.
  • Add nd_experiment_protocolprop. I use this to store protocol values specific to an nd_experiment.
  • Add nd_experiment_phenotypeprop. I use this to store phenotype observations specific to an nd_experiment.
  • Add cvalue_id to NatDiv property tables and related property tables like projectprop. This allows for postcomposition of cvterms like units to the property type_id.