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SGN abstract: _Associating Solanaceae loci with phenotypes:_
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GMOD Meeting Schedule -- [http://www.gmod.org/meeting_registration Registration link]<br /> January 18-19, 2007<br /> Town and Country Hotel, San Diego, CA<br /> Sheffield Room
  
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The SOL Genomics Network is a Clade Oriented Database (COD) containing<br /> genomic, genetic and taxonomic information for species in the Euasterid<br /> clade.
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Thurs, 18 January<br /><br />[http://www.gmod.org/user-interface-caucus  MOD User InterFace Caucus]
  
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We have recently added to SGN databases of Solanaceae genes and<br /> phenotypes, with a framework for simple and advanced searches by name,<br /> function, phenotype, map position, sequence, and ontology annotations.<br /> Phenotypes are represented as accessions of populations (mutants and<br /> mapping populations), and may be linked to one or more loci.
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{| width="50%"
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| width="25%" | 8:30am
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| Welcome, Introductions, GMOD chat
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|-
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| 9:00
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|
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[http://www.gmod.org/face_caucus_sgd_searches_and_retrieval_tools_at_sgd SGD: Dianna Fisk]
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|-
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| 9:25
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| TAIR: Eva Huala
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|-
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| 9:50
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|
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[http://www.gmod.org/face_caucus_sgn_associating_solanaceae_loci_with_phenotype SGN: Robert Buels]
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|-
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| 10:15
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| break
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|-
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| 10:30
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| NCBI: Kim Pruitt
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|-
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| 10:55
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| BioCyc: Peter Karp
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|-
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| 11:20
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|
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[http://www.gmod.org/face_caucus_ucsc_user_interface_issues_challenges_in_a_many_organism_database  UCSC: Kate Rosenbloom]
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|-
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| 11:45
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| Morning wrap-up and general discussion on MOD UIs
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|-
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| 12:00
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| Lunch break
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|-
 +
| 1:30
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| RGD: Susan Bromberg, George Kowalski
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|-
 +
| 1:55
 +
| FlyBase: Josh Goodman &amp; others
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|-
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| 2:20
 +
| FlyMine/InterMine: Gos Micklem
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|-
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| 2:45
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|
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[http://www.gmod.org/face_caucus_apidb_user_studies_and_impact_on_development ApiDB (GUS): Eileen Kraemer &amp; Steve Fischer]
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|-
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| 3:15
 +
| break
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|-
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| 3:30
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| ZFIN: Ceri Van Slyke
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|-
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| 3:55
 +
| Wormbase: Lincoln Stein
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|-
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| 4:20
 +
| Caucus general discussion on good user interface<br /> practices, new approaches, commonalities
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|-
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| 5:00
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| end session/dinner
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|-
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| 7pm-ish
 +
| tentative Chado database discussion/tutorial session
 +
|-
 +
|}
 +
 
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Friday, 19 January <br /><br />[http://www.gmod.org/middleware-bake-off Middleware for Chado databases]

Revision as of 18:13, 25 January 2007


GMOD Meeting Schedule -- Registration link
January 18-19, 2007
Town and Country Hotel, San Diego, CA
Sheffield Room

Thurs, 18 January

MOD User InterFace Caucus

8:30am Welcome, Introductions, GMOD chat
9:00

SGD: Dianna Fisk

9:25 TAIR: Eva Huala
9:50

SGN: Robert Buels

10:15 break
10:30 NCBI: Kim Pruitt
10:55 BioCyc: Peter Karp
11:20

UCSC: Kate Rosenbloom

11:45 Morning wrap-up and general discussion on MOD UIs
12:00 Lunch break
1:30 RGD: Susan Bromberg, George Kowalski
1:55 FlyBase: Josh Goodman & others
2:20 FlyMine/InterMine: Gos Micklem
2:45

ApiDB (GUS): Eileen Kraemer & Steve Fischer

3:15 break
3:30 ZFIN: Ceri Van Slyke
3:55 Wormbase: Lincoln Stein
4:20 Caucus general discussion on good user interface
practices, new approaches, commonalities
5:00 end session/dinner
7pm-ish tentative Chado database discussion/tutorial session

Friday, 19 January

Middleware for Chado databases

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