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GBrowse
Available on platform web  +
Has URL http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/  + , https://github.com/GMOD/GBrowse  + , http://gbrowse.org  + , http://www.wormbase.org/tools/genome/gbrowse/c_elegans/  + , http://flybase.org/cgi-bin/gbrowse/dmel  + , http://hapmap.ncbi.nlm.nih.gov/cgi-perl/gbrowse/gbrowse  +
Has description GBrowse is a combination of database and iGBrowse is a combination of database and interactive web pages for manipulating and displaying annotations on genomes. Features include: * Simultaneous bird's eye and detailed views of the genome. * Scroll, zoom, center. * Use a variety of [[GBrowse Configuration HOWTO#Glyphs and Glyph Options|premade glyphs]] or create your own. * Attach arbitrary URLs to any annotation. * Order and appearance of tracks are customizable by administrator and end-user. * Search by annotation ID, name, or comment. * Supports third party annotation using [[GFF]] formats. * Settings persist across sessions. * DNA and [[GFF]] dumps. * Connectivity to different databases, including [[BioSQL]] and [[Chado]]. * Multi-language support. * Third-party feature loading. * Customizable [[GBrowse Plugins|plug-in]] architecture (e.g. run [[wp:BLAST|BLAST]], dump & import many formats, find oligonucleotides, [[PrimerDesigner.pm|design primers]], create restriction maps, edit features) Note that the information on this page refers to GBrowse 2; GBrowse 1.x is recommended only for applications where legacy browser support is required and a single database is used.is required and a single database is used.  +
Has development status inactive  +
Has full name Generic Genome Browser  +
Has input format GFF3  + , GFF2  +
Has licence GPL2  + , Artistic License  +
Has logo GBrowseLogo.png  +
Has software maturity status mature  +
Has support status inactive  +
Has title WormBase  + , FlyBase  + , HapMap  +
Has topic GBrowse +
Is open source Yes  +
Link type download  + , source code  + , website  + , wild URL  +
Release date 1 January 2001  +
Tool functionality or classification Genome Visualization & Editing  +
Written in language Perl  +
Has queryThis property is a special property in this wiki. GBrowse + , GBrowse + , GBrowse + , GBrowse + , GBrowse + , GBrowse + , GBrowse + , GBrowse + , GBrowse + , GBrowse +
Categories GBrowse  + , GMOD Components  + , GMOD Component  + , SemanticLink  +
Modification dateThis property is a special property in this wiki. 10 April 2023 16:47:07  +
Has subobjectThis property is a special property in this wiki. GBrowse#http://sourceforge.net/projects/gmod/files/Generic%20Genome%20Browser/ + , GBrowse#https://github.com/GMOD/GBrowse + , GBrowse#http://gbrowse.org + , GBrowse#http://www.wormbase.org/tools/genome/gbrowse/c_elegans/ + , GBrowse#http://flybase.org/cgi-bin/gbrowse/dmel + , GBrowse#http://hapmap.ncbi.nlm.nih.gov/cgi-perl/gbrowse/gbrowse +
hide properties that link here 
GBrowse + , GBrowse NGS Tutorial + , GBrowse Tutorial 2012 + , GMOD Malaysia 2014/GBrowse Tutorial + Has topic
BioMart + , DIYA + , InterMine + , Tripal + Interacts with
Gbrowse + , Gbrowse installation + , Generic Genome Browser + , Ggb + , Ggb/ + , Ggb/INSTALL.html + , Ggb/ppm + redirect page
 

 

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