Difference between revisions of "Training and Outreach"
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− | | valign="top" | Finally, once or twice a year the GMOD community gathers to discuss [[GMOD Components]], best practices, and project direction. These meetings usually occur immediately before or after a major conference that is likely to be of interest to members of the community. Meetings are open to everyone: developers, users, and potential users. GMOD also sponsors a few other types of meetings such as [[Calendar#GMOD | + | | valign="top" | Finally, once or twice a year the GMOD community gathers to discuss [[GMOD Components]], best practices, and project direction. These meetings usually occur immediately before or after a major conference that is likely to be of interest to members of the community. Meetings are open to everyone: developers, users, and potential users. GMOD also sponsors a few other types of meetings such as [[Calendar#GMOD Event List|hackathons and conference workshops]]. |
− | The next meeting will be held [[March 2011 GMOD Meeting|March 5-6, 2011 at NESCent]], in Durham, North Carolina as a part of [[GMOD Americas 2011]]. The [[September 2010 GMOD Meeting|previous meeting]] was held 13-15 September in Cambridge, UK, as part of [[GMOD Europe 2010]] | + | The next meeting will be held [[March 2011 GMOD Meeting|March 5-6, 2011 at NESCent]], in Durham, North Carolina as a part of [[GMOD Americas 2011]]. The [[September 2010 GMOD Meeting|previous meeting]] was held 13-15 September in Cambridge, UK, as part of [[GMOD Europe 2010]]. See [[Meetings]] for more. |
|{{ImageRight|Sept2010MtgLogo170.png|September 2010 GMOD Meeting||September 2010 GMOD Meeting}} | |{{ImageRight|Sept2010MtgLogo170.png|September 2010 GMOD Meeting||September 2010 GMOD Meeting}} | ||
|} | |} |
Revision as of 22:50, 8 December 2010
Training and outreach is about several things. GMOD training teaches new and existing GMOD users how to use GMOD Components to help meet the goals of their organizations. GMOD outreach activities aim to inform biologists and bioinformaticists about what GMOD can do. This page describes GMOD training and outreach activities. See Support for other support options in GMOD.
Training and outreach are done by the GMOD Project Coordinator, the GMOD Help Desk, GMOD component developers, and by GMOD users.
Please contact the GMOD Help Desk if you have a training and outreach question or request.
Online Tutorials
In addition to in person training, there are in depth online tutorials on several GMOD Components:
Component | Title, Description |
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Apollo |
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BioMart |
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Chado |
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GMOD in the Cloud |
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CMap | |
Galaxy |
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GBrowse |
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GBrowse_syn |
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GFF3 |
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JBrowse |
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MAKER |
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Pathway Tools |
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SOBA |
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Tripal |
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WebApollo |
|
This website also has a large collection of HOWTOs on more specific tasks.
GMOD Schools
GMOD Schools are hands-on multi-day courses aimed at teaching new GMOD users how to get up and running with GMOD. Schools introduce participants to GMOD and focus on installation, configuration and integration of popular GMOD Components.
Date | School | Location | |
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2014 | February 26-28 | GMOD Malaysia 2014 | Kuala Lumpur, Malaysia |
May 19-23 | GMOD Online Training 2014 | Online! | |
2013 | July 19-23 | 2013 GMOD Summer School | NESCent, Durham, NC, United States |
2012 | August 24-29 | 2012 GMOD Summer School | NESCent, Durham, NC, United States |
2011 | March 8-12 | 2011 GMOD Spring Training | NESCent, Durham, NC, United States |
2010 | May 6-9 | 2010 GMOD Summer School - Americas | NESCent, Durham, NC, United States |
2009 | 3-6 August | 2009 GMOD Summer School - Europe | Oxford, United Kingdom |
16-19 July | 2009 GMOD Summer School - Americas | NESCent, Durham, NC, United States | |
2008 | 11-13 July | 2008 GMOD Summer School | NESCent, Durham, NC, United States |
GMOD Community Meetings
Finally, once or twice a year the GMOD community gathers to discuss GMOD Components, best practices, and project direction. These meetings usually occur immediately before or after a major conference that is likely to be of interest to members of the community. Meetings are open to everyone: developers, users, and potential users. GMOD also sponsors a few other types of meetings such as hackathons and conference workshops.
The next meeting will be held March 5-6, 2011 at NESCent, in Durham, North Carolina as a part of GMOD Americas 2011. The previous meeting was held 13-15 September in Cambridge, UK, as part of GMOD Europe 2010. See Meetings for more. |
Events: Courses, Meetings, Workshops, Presentations and Posters
The items listed here are either about GMOD and its components, or are of specific interest to the GMOD community. The GMOD Calendar also includes all these events, plus many more. Please see GMOD Promotion if you have an event or presentation you would like to promote within GMOD.
2013 Events
Date | Conference / Topic(s) | Location | Contact | ||||
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2 0 1 3 |
July 19-23 | 2013 GMOD Summer School Training course on all things GMOD |
NESCent, Durham, NC | GMOD Help Desk | |||
June 30 - July 2 | 2013 Galaxy Community Conference (GCC2013) The Galaxy project's annual meeting. |
Oslo, Norway | Dave Clements | ||||
April 7-10 | Biocuration 2013 | Cambridge, United Kingdom | n/a | ||||
April 5-6 | 2013 GMOD Meeting Colocated with and immediately before Biocuration 2013 |
Scott Cain | |||||
January | PAGXXI (Plant and Animal Genomes) See PAG 2013 for details of GMOD at PAGXXI |
San Diego, CA | Scott Cain |
2012 Events
Date | Conference / Topic(s) | Location | Contact | ||||
---|---|---|---|---|---|---|---|
2 0 1 2 |
August 24-29 | 2012 GMOD Summer School | NESCent, Durham, North Carolina, United States | Scott Cain | |||
July 25-27 | 2012 Galaxy Community Conference (GCC2012) The Galaxy project's annual meeting. |
Chicago, Illinois, United States | Dave Clements | ||||
April 5-6 | April 2012 GMOD Meeting Colocated with and immediately following Biocuration 2012 |
Washington, DC, United States | Scott Cain | ||||
April 2-4 | Biocuration 2012 | ||||||
January 23-25 | GMOD Workshop | Český Krumlov, Czech Republic | Scott Cain | ||||
January 8-21 | Workshop on Genomics Covers a plethora of topics, including Galaxy |
James Taylor | |||||
January 14-18 | Plant and Animal Genome XX (PAG 2012) There will once again be a strong GMOD presence at PAG, including a dedicated all-day GMOD Workshop. |
San Diego, California, United States | Scott Cain |
2011 Events
Date | Conference / Topic(s) | Location | Contact | |
---|---|---|---|---|
2 0 1 1 | ||||
October 23-24 | IEEE Symposium on Biological Data Visualization (BioVis 2011), part of VisWeek
|
Providence, Rhode Island, United States | Jeremy Goecks | |
October 12-13 | October 2011 GMOD Meeting | Ontario Institute for Cancer Research (OICR), Toronto, Canada | Scott Cain | |
September 28-30 | Genome Annotation Genome annotation using MAKER and Apollo. |
UC Davis Bioinformatics Core | Barry Moore | |
September 19-22 | Genome Informatics Workshop @ Beyond the Genome 2011 | Washington, DC, United States | Lincoln Stein, James Taylor | |
July 15-19 | ISMB/ECCB 2011 Included the Bioinformatics Open Source Conference (BOSC) and plenty of GMOD-related content. |
Vienna, Austria | Scott Cain | |
July 10-23 | Workshop on Comparative Genomics, North America Sessions on BioPerl, Galaxy and GBrowse_syn |
Fort Collins, Colorado, United States | Jason Stajich, Dan Blankenberg, Sheldon McKay | |
June 21-22 | Pathway Tools Flux Balance Analysis Tutorial | SRI, Menlo Park, California, United States | Tomer Altman | |
June 9-12 | Arthropod Genomics Symposium GMOD had a strong presence with a mixture of talks, poster, and these workshops:
|
Kansas City, Missouri, United States | Scott Cain, Dave Clements, Sheldon McKay | |
May 28-31 | European Human Genetics Conference 2011 Galaxy Workshop |
Amsterdam, The Netherlands | Dave Clements | |
May 25-26 | 2011 Galaxy Community Conference
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Conference Centre De Werelt, Lunteren, The Netherlands | Dave Clements | |
April 13-14 | NBIC Galaxy Hackathon | Belgium (near Maastricht, the Netherlands) | NBIC | |
April 12-14 | Dynamically Scalable, Accessible Analysis for High-Throughput Sequence Data (Galaxy) | Bio-IT World, Boston, Massachusetts, United States | Enis Afgan | |
March 5-12 | GMOD Americas 2011 This event includes:
|
NESCent, Durham, North Carolina, United States | Scott Cain, Dave Clements | |
February 19-22 | Galaxy Next Generation Sequencing Functionality from Sample Tracking to SNP Calling | ABRF 2011, San Antonio, Texas, United States | Greg Von Kuster | |
February 2-5 | Management and Analysis of Second and Third Generation Sequencing Data with Galaxy | Advances in Genome Biology and Technology (AGBT 2011), Marco Island, Florida, United States | Anton Nekrutenko, James Taylor | |
January 15-19 | Plant and Animal Genome XIX There was a strong GMOD presence at PAG, including for the first time, a dedicated all-day GMOD Workshop. |
San Diego, California, United States | Scott Cain, Dave Clements | |
January 9-21 | Workshop on Comparative Genomics, Europe Sessions on Galaxy and GBrowse_syn |
Český Krumlov, Czech Republic | Anton Nekrutenko, Sheldon McKay |
2002 through 2010 Events
See the Posters and Presentations categories for many additional presentations by GMOD staff, developers and users.