Difference between revisions of "Template:ChadoTable assay"
From GMOD
(Table definition, first upload on 2010/11/22.) |
(Table definition for Chado on 2010/11/24) |
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− | <noinclude>{{ChadoTableTemplateHeader}}</noinclude> | + | <protect><noinclude>{{ChadoTableTemplateHeader}}</noinclude> |
+ | {{ChadoTableDesc|Mage|assay|An assay consists of a physical instance of | ||
an array, combined with the conditions used to create the array | an array, combined with the conditions used to create the array | ||
(protocols, technician information). The assay can be thought of as a hybridization.}} | (protocols, technician information). The assay can be thought of as a hybridization.}} | ||
{{ChadoColumnsHeader|Mage|assay}} | {{ChadoColumnsHeader|Mage|assay}} | ||
− | {{ChadoColumnDesc||assay_id|serial|''PRIMARY KEY'' | + | {{ChadoColumnDesc||assay_id|serial|''PRIMARY KEY''<br /> |
− | + | ||
}} | }} | ||
− | {{ChadoColumnDesc|{{ChadoModuleTableLink|Mage|arraydesign}}|arraydesign_id|integer|''NOT NULL'' | + | {{ChadoColumnDesc|{{ChadoModuleTableLink|Mage|arraydesign}}|arraydesign_id|integer|''NOT NULL''<br /> |
− | + | ||
}} | }} | ||
{{ChadoColumnDesc|{{ChadoModuleTableLink|Mage|protocol}}|protocol_id|integer|}} | {{ChadoColumnDesc|{{ChadoModuleTableLink|Mage|protocol}}|protocol_id|integer|}} | ||
− | {{ChadoColumnDesc||assaydate|timestamp without time zone|''DEFAULT ''now() | + | {{ChadoColumnDesc||assaydate|timestamp without time zone|''DEFAULT ''now()<br /> |
− | + | ||
}} | }} | ||
{{ChadoColumnDesc||arrayidentifier|text|}} | {{ChadoColumnDesc||arrayidentifier|text|}} | ||
{{ChadoColumnDesc||arraybatchidentifier|text|}} | {{ChadoColumnDesc||arraybatchidentifier|text|}} | ||
− | {{ChadoColumnDesc|{{ChadoModuleTableLink|Contact|contact}}|operator_id|integer|''NOT NULL'' | + | {{ChadoColumnDesc|{{ChadoModuleTableLink|Contact|contact}}|operator_id|integer|''NOT NULL''<br /> |
− | + | ||
}} | }} | ||
{{ChadoColumnDesc|{{ChadoModuleTableLink|General|dbxref}}|dbxref_id|integer|}} | {{ChadoColumnDesc|{{ChadoModuleTableLink|General|dbxref}}|dbxref_id|integer|}} | ||
− | {{ChadoColumnDesc||name|text|''UNIQUE'' | + | {{ChadoColumnDesc||name|text|''UNIQUE''<br /> |
− | + | ||
}} | }} | ||
{{ChadoColumnDesc||description|text|}} | {{ChadoColumnDesc||description|text|}} | ||
Line 26: | Line 22: | ||
{{ChadoTablesReferencingHeader|assay}} | {{ChadoTablesReferencingHeader|assay}} | ||
− | + | * {{ChadoReferencingTable|Mage|acquisition}} | |
− | * | + | * {{ChadoReferencingTable|Mage|assay_biomaterial}} |
+ | * {{ChadoReferencingTable|Mage|assay_project}} | ||
+ | * {{ChadoReferencingTable|Mage|assayprop}} | ||
+ | * {{ChadoReferencingTable|Mage|control}} | ||
+ | * {{ChadoReferencingTable|Mage|study_assay}} | ||
+ | * {{ChadoReferencingTable|Mage|studyfactorvalue}} | ||
</protect> | </protect> |
Revision as of 19:23, 24 November 2010
This template is a Chado Table Template. It defines a single table from the Chado schema, and every Chado table has a template like this one. This template is automatically included in two places:
- The module page for the module the table is a part of. This is where updates and comments should be posted.
- The Chado Tables page, which lists all tables.
You can include this template anywhere you want to show the table description.
Table: | assay |
Module: | Mage |
An assay consists of a physical instance of an array, combined with the conditions used to create the array (protocols, technician information). The assay can be thought of as a hybridization.
FK | Name | Type | Description |
---|---|---|---|
assay_id | serial | PRIMARY KEY | |
arraydesign | arraydesign_id | integer | NOT NULL |
protocol | protocol_id | integer | |
assaydate | timestamp without time zone | DEFAULT now() | |
arrayidentifier | text | ||
arraybatchidentifier | text | ||
contact | operator_id | integer | NOT NULL |
dbxref | dbxref_id | integer | |
name | text | UNIQUE | |
description | text |
Tables referencing assay via foreign key constraints: