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  • ...m/~brill/blog.htm blog], [http://research.microsoft.com/~brill/ homepage]''deprecated''). RBT seems to be no longer available at JHU. A copy appears to be avai
    5 KB (697 words) - 17:56, 17 October 2013
  • * Parenting a CDS/polypeptide directly on a gene is deprecated because the gene (sensu eukaryota) includes nontranscribed regions
    4 KB (611 words) - 19:58, 22 April 2008
  • <div class="emphasisbox">The information below is deprecated.</div>
    8 KB (799 words) - 20:37, 8 August 2018
  • ...f GFF supported in GMOD: [[#GFF3|GFF3]] and [[#GFF2|GFF2]]. GFF2 is now ''deprecated''. [[GFF2]] is a supported [[#GFF|GFF]] format in GMOD, '''but it is now deprecated and if you have a choice you should use [[#GFF3|GFF3]]'''. Unfortunately,
    14 KB (2,081 words) - 02:50, 14 March 2014
  • ...han one level of nesting, and several other common situations. '''GFF2 is deprecated and if possible you are strongly encouraged to use [[GFF3]].''' ...he same as providing the <tt>-user</tt> option to <tt>db_args</tt>, and is deprecated.
    79 KB (12,563 words) - 16:45, 15 August 2011
  • | Quite fast; large user base; Have to use this if your data is in the (now deprecated) [[GFF2]] format.
    3 KB (443 words) - 16:22, 7 August 2012
  • description = Zebrafish genome, build 1 (deprecated) description = Zebrafish genome, build 1 (deprecated)
    101 KB (15,507 words) - 04:44, 9 January 2014
  • [[GFF2]] is a supported format in GMOD, '''but it is now deprecated and if you have a choice you should use GFF3'''. Unfortunately, data is so
    16 KB (2,336 words) - 19:49, 10 September 2012
  • [[gmod:GFF2|GFF2]] is a supported format in GMOD, '''but it is now deprecated and if you have a choice you should use GFF3'''. Unfortunately, data is so
    16 KB (2,387 words) - 22:13, 11 February 2014
  • ...s/GFF/GFF_Spec.shtml GFF2] is a supported format in GMOD, '''but it is now deprecated and if you have a choice you should use [[GFF3]]'''. Unfortunately, data i == GFF2 is Deprecated! ==
    17 KB (2,719 words) - 13:27, 21 April 2017
  • *''fix_fasta'' - Deprecated, use fasta_tool
    80 KB (12,961 words) - 23:47, 29 July 2013
  • :This script is deprecated. You can use the [[GBrowse_syn_Scripts#load_alignments_msa.pl|load_alignme :This script is deprecated. You can use the [[GBrowse_syn_Scripts#load_alignments_msa.pl|load_alignme
    6 KB (931 words) - 22:39, 21 February 2013
  • == Recommended Deprecated Fields == are deprecated to break the connection between the phenotype value and the
    4 KB (680 words) - 23:12, 19 August 2015
  • Deprecated and superceded by phenotypeprop.
    5 KB (680 words) - 22:10, 10 December 2010
  • ** Caching functionality (firebug report too?): Has deprecated as a priority as current solution is adequate. Speed is
    2 KB (320 words) - 23:24, 6 January 2011
  • ....uniquename. 2) Added phenotype.units_id. 3) Added phenotypeprop table. 4) Deprecated phenotype_cvterm table.
    11 KB (1,777 words) - 15:05, 4 February 2012
  • [[GFF2]] is a supported format in GMOD, '''but it is now deprecated and if you have a choice you should use GFF3'''. Unfortunately, data is so
    16 KB (2,350 words) - 20:25, 12 July 2016
  • | Deprecated option; do not use.
    13 KB (2,003 words) - 16:05, 19 April 2012
  • | Deprecated option; do not use.
    12 KB (1,878 words) - 16:05, 19 April 2012
  • | Deprecated option; do not use.
    13 KB (2,033 words) - 16:05, 19 April 2012
  • ...ph to generate. Options are "boxes", "line","points", or "linepoints". The deprecated "boxes" subtype is equivalent to "histogram".
    17 KB (2,698 words) - 16:05, 19 April 2012
  • ...ph to generate. Options are "boxes", "line","points", or "linepoints". The deprecated "boxes" subtype is equivalent to "histogram".
    15 KB (2,325 words) - 16:05, 19 April 2012
  • ...ph to generate. Options are "boxes", "line","points", or "linepoints". The deprecated "boxes" subtype is equivalent to "histogram".
    15 KB (2,284 words) - 16:06, 19 April 2012
  • | Deprecated option; do not use.
    12 KB (1,914 words) - 16:06, 19 April 2012
  • ...or "whiskers" (for a whiskerplot showing mean, +/- stdev and max/min. The deprecated "boxes" subtype is a synonym for "histogram."
    20 KB (3,072 words) - 16:06, 19 April 2012
  • ...ph to generate. Options are "boxes", "line","points", or "linepoints". The deprecated "boxes" subtype is equivalent to "histogram".
    15 KB (2,351 words) - 16:06, 19 April 2012
  • ...ph to generate. Options are "boxes", "line","points", or "linepoints". The deprecated "boxes" subtype is equivalent to "histogram".
    17 KB (2,633 words) - 16:06, 19 April 2012
  • ...ph to generate. Options are "boxes", "line","points", or "linepoints". The deprecated "boxes" subtype is equivalent to "histogram".
    17 KB (2,680 words) - 16:06, 19 April 2012
  • ...ph to generate. Options are "boxes", "line","points", or "linepoints". The deprecated "boxes" subtype is equivalent to "histogram".
    15 KB (2,348 words) - 16:06, 19 April 2012
  • [[GFF2]] is a supported format in GMOD, '''but it is now deprecated and if you have a choice you should use GFF3'''. Unfortunately, data is so
    16 KB (2,352 words) - 21:54, 11 September 2012
  • *''fix_fasta'' - Deprecated, use fasta_tool
    80 KB (12,923 words) - 20:52, 27 August 2013
  • [[GFF2|GFF2]] is a supported format in GMOD, '''but it is now deprecated and if you have a choice you should use GFF3'''. Unfortunately, data is so
    16 KB (2,345 words) - 00:23, 14 February 2013
  • *''fix_fasta'' - Deprecated, use fasta_tool
    69 KB (11,026 words) - 20:52, 27 August 2013
  • *''fix_fasta'' - Deprecated, use fasta_tool *''gff3_preds2models'' - Deprecated pass the predictions to MAKER in the <tt>maker_opts.ctl</tt> in gff3 format
    85 KB (13,463 words) - 00:56, 27 February 2014
  • [[GFF2]] is a supported format in GMOD, '''but it is now deprecated and if you have a choice you should use GFF3'''. Unfortunately, data is so
    16 KB (2,318 words) - 04:56, 19 May 2014
  • *''fix_fasta'' - Deprecated, use fasta_tool
    80 KB (12,952 words) - 03:53, 19 May 2014

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