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File:GMODGBrowseSMBE2009.pdf ...neration Sequencing|next generation sequence data]] using the Bio-SamTools SAMtools [[GBrowse Adaptors|GBrowse adaptor]]. This was [[Training and Outreach|pre(18.41 MB) - 03:17, 15 July 2009File:AGA NGS 2009.pdf Discusses using [[GBrowse]] and SAMtools to visualize [[next generation sequencing|Next Generation Sequence Data]].(17.08 MB) - 06:45, 30 November 2009File:Aug2009Sam.pdf = Quest for Standard: Sequence alignment/map format (SAM) and SAMtools = ...9 GMOD Meeting#Quest for Standard: Sequence alignment/map format (SAM) and SAMtools|meeting writeup]] for a summary of this talk.(582 KB) - 05:11, 30 August 2009File:OCCBio GBrowse NGS.pdf [[Category:SAMtools]](979 KB) - 14:44, 16 June 2010File:PAG 2011 poster Nathalie.Choisne.pdf ...PHiTS pipeline is currently running with the following public tools ''BWA, SAMtools, Tablet'' and ''VarScan.'' MAPHiTS workflow is able to deliver all SNPs and(1.33 MB) - 19:01, 8 October 2012