User contributions
- 14:56, 25 June 2019 (diff | hist) . . (-419) . . Public Chado Databases (→FlyBase) (current)
- 17:23, 30 June 2016 (diff | hist) . . (-50) . . Jun 2016 GMOD Meeting (→Walnut room, Thursday, June 30)
- 16:15, 30 November 2015 (diff | hist) . . (-90) . . Public Chado Databases (Updated FlyBase Chado database info.)
- 17:28, 23 April 2013 (diff | hist) . . (+34) . . Chado - Getting Started (→Documentation: Added performance tips link.)
- 17:16, 23 April 2013 (diff | hist) . . (+137) . . m GBrowse Backends (→Bio::DB::Das::Chado: Added link to PostgreSQL performance tips) (current)
- 15:58, 23 April 2013 (diff | hist) . . (-4,528) . . PostgreSQL Performance Tips
- 15:13, 23 April 2013 (diff | hist) . . (+22) . . PostgreSQL Performance Tips (→General Tips)
- 15:13, 23 April 2013 (diff | hist) . . (+63) . . PostgreSQL Performance Tips
- 15:07, 23 April 2013 (diff | hist) . . (+161) . . PostgreSQL Performance Tips (→General Tips: Updated and removed dead links.)
- 19:37, 24 August 2012 (diff | hist) . . (-20) . . News/FlyBase jobs (current)
- 15:15, 23 August 2012 (diff | hist) . . (-149) . . News/FlyBase jobs (Removed outdated jobs and added current posting.)
- 15:48, 12 September 2011 (diff | hist) . . (+260) . . Comparison of XORT and Hibernate for Chado reporting (Added disclaimer about the age of this document.) (current)
- 20:18, 7 September 2011 (diff | hist) . . (-4) . . m GBrowse 2.0 Install HOWTO/Advanced (→WebGBrowse)
- 20:18, 7 September 2011 (diff | hist) . . (-3) . . m GBrowse 2.0 Install HOWTO/Advanced (→WebGBrowse: Fixed "University of Indiana")
- 17:27, 7 September 2011 (diff | hist) . . (+19) . . m GBrowse 2.0 Prerequisites (→Mac Ports Way: Added cd step after git cloning for those following who may be following literally.)
- 17:15, 16 August 2011 (diff | hist) . . (-43) . . October 2011 GMOD Meeting (→Suggested agenda items)
- 12:33, 26 April 2011 (diff | hist) . . (-425) . . News/FlyBase jobs (Removed Cambridge jobs.)
- 18:17, 25 April 2011 (diff | hist) . . (+894) . . N News/FlyBase jobs (New page: '''FlyBase jobs''' FlyBase currently has [http://flybase.org/static_pages/news/positions.html 4 job openings] at various sites in the United States and United Kingdom. * [http://flybase....)
- 16:01, 8 February 2011 (diff | hist) . . (+1) . . m Satellite Meetings - GMOD Americas 2011
- 15:59, 8 February 2011 (diff | hist) . . (+16) . . Satellite Meetings - GMOD Americas 2011 (Marked GMOD RPC meeting as canceled.)
- 16:22, 1 December 2010 (diff | hist) . . (+148) . . Satellite Meetings - GMOD Americas 2011 (Added GMOD RPC meeting.)
- 10:42, 14 September 2010 (diff | hist) . . (-36) . . m September 2010 GMOD Meeting (→Tuesday, 14 September: Added RPC slides.)
- 10:38, 14 September 2010 (diff | hist) . . (0) . . N File:GMOD RPC Sept 2010.pdf (current)
- 01:39, 11 September 2010 (diff | hist) . . (-3) . . m September 2010 GMOD Meeting (→Confirmed speakers/topics: Corrected Chris Hemmerich's institution.)
- 23:44, 20 July 2010 (diff | hist) . . (0) . . m GMOD News (→ISMB 2010 Talks & Posters: fixed minor typo with ISMB)
- 20:05, 16 July 2010 (diff | hist) . . (+297) . . September 2010 GMOD Meeting (→Agenda Proposals)
- 19:07, 26 January 2010 (diff | hist) . . (+62) . . m January 2010 GMOD Meeting (→Friday, January 15)
- 19:02, 26 January 2010 (diff | hist) . . (+48) . . N File:Flybase topoview.pdf (FlyBase TopoView GBrowse glyph for RNA-Seq data.)
- 06:07, 16 January 2010 (diff | hist) . . (+17) . . m January 2010 GMOD Meeting (→Thursday, January 14: Added link to GMOD RPC API)
- 06:04, 16 January 2010 (diff | hist) . . (-1) . . m GMOD RPC API
- 06:02, 16 January 2010 (diff | hist) . . (+1,824) . . GMOD RPC API (First draft of v1.1 after GMOD meeting and hackathon. Still needs work after I fly back and get some sleep.)
- 18:18, 15 January 2010 (diff | hist) . . (+37) . . January 2010 GMOD Meeting (→Friday, January 15)
- 17:00, 15 January 2010 (diff | hist) . . (-19) . . Talk:GMOD REST Hackathon (→Info from Adrian)
- 18:51, 13 January 2010 (diff | hist) . . (+181) . . Talk:GMOD REST Hackathon
- 18:44, 13 January 2010 (diff | hist) . . (+130) . . Talk:GMOD REST Hackathon
- 18:32, 13 January 2010 (diff | hist) . . (+2,855) . . Talk:GMOD REST Hackathon
- 18:11, 13 January 2010 (diff | hist) . . (+215) . . N Talk:GMOD REST Hackathon (New page: * POST for read operations is ok to get around URL character limits w/ GET * Pretty URLs are limited and we should use a mix pretty URLS and param/value CGI calls * Extend services for SO...)
- 14:28, 12 January 2010 (diff | hist) . . (+40) . . GMOD REST Hackathon (Starting in hotel bar.)
- 20:19, 23 November 2009 (diff | hist) . . (-7) . . m GMOD REST Hackathon (Finalized date)
- 18:08, 20 November 2009 (diff | hist) . . (+18) . . m GMOD REST Hackathon (→Schedule)
- 16:39, 20 November 2009 (diff | hist) . . (+9) . . m GMOD REST Hackathon
- 16:37, 20 November 2009 (diff | hist) . . (+979) . . N GMOD REST Hackathon (Created a page for the GMOD REST API hackathon)
- 15:53, 17 September 2009 (diff | hist) . . (+231) . . m FlyBase Field Mapping Tables (→FlyBase Clone Report: Added stage and updated tissue source.)
- 20:17, 14 September 2009 (diff | hist) . . (+1,230) . . GMOD News (→News Items)
- 05:32, 6 August 2009 (diff | hist) . . (-1) . . m GMOD RPC API (→JSON Result)
- 05:30, 6 August 2009 (diff | hist) . . (0) . . m GMOD RPC API (→XML Result)
- 05:30, 6 August 2009 (diff | hist) . . (0) . . m GMOD RPC API (→Example URLs)
- 05:28, 6 August 2009 (diff | hist) . . (+2) . . m GMOD RPC API (→URL)
- 01:58, 22 July 2009 (diff | hist) . . (+49) . . m August 2009 GMOD Meeting (→Agenda Suggestions)
- 20:35, 29 June 2009 (diff | hist) . . (-246) . . m GMOD RPC API (→TODO: Removed TODOs based on discussions and/or the KISS principle.)
- 20:32, 29 June 2009 (diff | hist) . . (+3) . . m GMOD RPC API (→Example URLs)
- 20:31, 29 June 2009 (diff | hist) . . (-1) . . m GMOD RPC API (→URL)
- 20:30, 29 June 2009 (diff | hist) . . (+3,154) . . m GMOD RPC API (Added gene location service.)
- 19:45, 29 June 2009 (diff | hist) . . (-2,329) . . m GMOD RPC API (Removed gene keyword search.)
- 19:42, 29 June 2009 (diff | hist) . . (+1,029) . . m GMOD RPC API
- 18:56, 29 June 2009 (diff | hist) . . (+1) . . GMOD RPC API (→JSON Result)
- 18:41, 29 June 2009 (diff | hist) . . (+1,461) . . m GMOD RPC API
- 18:20, 29 June 2009 (diff | hist) . . (+221) . . m GMOD RPC API
- 17:38, 29 June 2009 (diff | hist) . . (+743) . . m GMOD RPC API
- 17:25, 29 June 2009 (diff | hist) . . (-163) . . m GMOD RPC API
- 16:10, 29 June 2009 (diff | hist) . . (-218) . . m GMOD RPC API (→XML Result:)
- 15:53, 29 June 2009 (diff | hist) . . (-547) . . m GMOD RPC API (→JSON Result)
- 15:38, 29 June 2009 (diff | hist) . . (-330) . . m GMOD RPC API (→XML Result:)
- 15:14, 29 June 2009 (diff | hist) . . (+243) . . m GMOD RPC API (→XML Result:)
- 15:02, 29 June 2009 (diff | hist) . . (+109) . . m GMOD RPC API (→JSON Result)
- 15:01, 29 June 2009 (diff | hist) . . (+105) . . m GMOD RPC API (→XML Result:)
- 14:55, 29 June 2009 (diff | hist) . . (+24) . . m GMOD RPC API (→JSON Result)
- 14:53, 29 June 2009 (diff | hist) . . (+36) . . m GMOD RPC API (→XML Result:)
- 14:51, 29 June 2009 (diff | hist) . . (+28) . . m GMOD RPC API (→XML Result:)
- 17:44, 24 June 2009 (diff | hist) . . (+75) . . m August 2009 GMOD Meeting (Added GMOD REST API as discussion point.)
- 17:20, 18 May 2009 (diff | hist) . . (+36) . . GMOD RPC API (Changed organism->taxonomy_id)
- 17:04, 18 May 2009 (diff | hist) . . (+47) . . m GMOD RPC API (Added link for GMOD REST API use cases)
- 21:20, 15 May 2009 (diff | hist) . . (+1,604) . . GMOD RPC API (First draft of organism wide ortholog search.)
- 20:22, 15 May 2009 (diff | hist) . . (+2,126) . . GMOD RPC API (Added organism wide ortholog search service, need to work out XML attribute representation in JSON.)
- 19:05, 14 May 2009 (diff | hist) . . (+97) . . m GMOD RPC API (Added related project links, added GO NOT, specified goals a bit more.)
- 17:10, 22 January 2009 (diff | hist) . . (+90) . . Web services working group
- 18:51, 21 January 2009 (diff | hist) . . (+135) . . m GMOD RPC API
- 21:08, 20 January 2009 (diff | hist) . . (-86) . . m GMOD RPC API (→TODO)
- 20:58, 20 January 2009 (diff | hist) . . (+448) . . m GMOD RPC API (→Compression)
- 20:31, 20 January 2009 (diff | hist) . . (0) . . m GMOD RPC API (→Example URLs)
- 20:30, 20 January 2009 (diff | hist) . . (-23) . . m GMOD RPC API (Fixed example URL)
- 20:28, 20 January 2009 (diff | hist) . . (+511) . . GMOD RPC API (Added fetch API)
- 10:52, 19 January 2009 (diff | hist) . . (+2,046) . . GMOD RPC API (Added keyword search.)
- 06:22, 18 January 2009 (diff | hist) . . (+6,468) . . GMOD RPC API (Added more specs.)
- 18:37, 17 January 2009 (diff | hist) . . (+173) . . m GMOD RPC API (Brief note about compression.)
- 18:33, 17 January 2009 (diff | hist) . . (+3,080) . . GMOD RPC API (More spec work.)
- 00:55, 17 January 2009 (diff | hist) . . (+107) . . Bio GMOD GenericGenePage (Added flybase example)
- 00:52, 17 January 2009 (diff | hist) . . (+1,140) . . GMOD RPC API
- 19:59, 16 January 2009 (diff | hist) . . (+1,707) . . N GMOD RPC API (Initial REST page start.)
- 17:22, 16 January 2009 (diff | hist) . . (+73) . . Web services working group (Added categories.)
- 17:14, 16 January 2009 (diff | hist) . . (+166) . . m Web services working group
- 17:05, 16 January 2009 (diff | hist) . . (0) . . m Web services working group (Semantic web working group moved to Web services working group)
- 17:05, 16 January 2009 (diff | hist) . . (+40) . . N Semantic web working group (Semantic web working group moved to Web services working group) (current)
- 15:43, 16 January 2009 (diff | hist) . . (+149) . . m Web services working group (Adding pointer to gmod-devel)
- 15:09, 16 January 2009 (diff | hist) . . (+1,305) . . N Web services working group (Initial draft of the semantic web working group page.)
- 22:19, 15 January 2009 (diff | hist) . . (0) . . N File:Jan2009RESTfulMODs.pdf (current)
- 22:18, 15 January 2009 (diff | hist) . . (0) . . N File:Jan2009RESTfulMODs.ppt (current)
- 17:21, 15 January 2009 (diff | hist) . . (-3) . . m January 2009 GMOD Meeting (Changed title of my talk.)
- 21:07, 12 December 2008 (diff | hist) . . (+32,497) . . FlyBase Field Mapping Tables (Added constructs and edits from others.)
- 22:08, 11 December 2008 (diff | hist) . . (+38,177) . . FlyBase Field Mapping Tables (Added clones and edits from others.)
- 18:38, 11 December 2008 (diff | hist) . . (+147) . . m January 2009 GMOD Meeting (common gene page)
- 16:33, 9 December 2008 (diff | hist) . . (+34,929) . . FlyBase Field Mapping Tables (Added all current FlyBase data objects. Not all reports and complete.)
- 20:29, 8 December 2008 (diff | hist) . . (+32,771) . . FlyBase Field Mapping Tables (Added stocks, transcripts, and balancer reports)
- 18:11, 16 July 2008 (diff | hist) . . (-128) . . XORT Dumper HOWTO (Added tags to enable markup.)
- 13:30, 10 June 2008 (diff | hist) . . (+1,976) . . m FlyBase Field Mapping Tables (Replaced all tabs with 2 spaces.)
- 21:37, 9 June 2008 (diff | hist) . . (+23,945) . . FlyBase Field Mapping Tables (Added reference report sql.)
- 18:46, 6 June 2008 (diff | hist) . . (+695) . . FlyBase Field Mapping Tables (Updated SQL formatting.)
- 20:45, 5 June 2008 (diff | hist) . . (+29,490) . . FlyBase Field Mapping Tables (Merged genes and proteins into one doc. Completed protein SQL.)
- 14:18, 5 June 2008 (diff | hist) . . (-231) . . m FlyBase Chado (current)
- 14:08, 5 June 2008 (diff | hist) . . (-51) . . m FlyBase Chado (Changed field mapping table link.)
- 14:08, 5 June 2008 (diff | hist) . . (0) . . m FlyBase Field Mapping Tables (FlyBase Gene Report moved to FlyBase Field Mapping Tables: Trying to merge all mapping tables into one doc.)
- 21:37, 4 June 2008 (diff | hist) . . (+33) . . m FlyBase Chado (Adding the polypeptide report link.)
- 20:03, 4 June 2008 (diff | hist) . . (0) . . m FlyBase Field Mapping Tables
- 20:02, 4 June 2008 (diff | hist) . . (+74) . . m FlyBase Chado (Adding a link to the comparative genomics data doc.)
- 19:49, 4 June 2008 (diff | hist) . . (+41) . . Nm Category:Chado FlyBase (Trying to add FlyBase Chado as a subcategory of Chado and FlyBase) (current)
- 19:45, 4 June 2008 (diff | hist) . . (+39,231) . . N FlyBase Field Mapping Tables (Adding a first draft of the FlyBase gene report mapping table.)
- 19:42, 4 June 2008 (diff | hist) . . (+1,005) . . N FlyBase Chado (Started a page on FlyBase Chado.)
- 14:41, 4 June 2008 (diff | hist) . . (+14) . . m XORT Dumper HOWTO (Fixed author link.)
- 19:22, 3 June 2008 (diff | hist) . . (+19) . . m XORT Dumper HOWTO (Added the Chado category.)
- 19:21, 3 June 2008 (diff | hist) . . (0) . . m XORT Dumper HOWTO (XORT Dump HOWTO moved to XORT Dumper HOWTO: Makes more sense.)
- 19:21, 3 June 2008 (diff | hist) . . (+31) . . N XORT Dump HOWTO (XORT Dump HOWTO moved to XORT Dumper HOWTO: Makes more sense.) (current)
- 18:11, 3 June 2008 (diff | hist) . . (+550) . . m XORT Dumper HOWTO (Small wording tweaks.)
- 16:11, 3 June 2008 (diff | hist) . . (+3,651) . . XORT Dumper HOWTO (Tweaked the dumpspec examples some more.)
- 21:02, 2 June 2008 (diff | hist) . . (+2,881) . . XORT Dumper HOWTO (Added some initial dumpspec examples. Still need to add some more and clean up the text.)
- 19:49, 2 June 2008 (diff | hist) . . (+251) . . XORT Dumper HOWTO (Updated initial setup for Ubuntu 8.04.)
- 19:58, 22 April 2008 (diff | hist) . . (-35) . . Chado New Users (Removed denormalized statement. The public FlyBase chado dumps contain everything that is in the production database (fully normalized) plus some denormalized features.) (current)
- 19:22, 22 April 2008 (diff | hist) . . (-9) . . m GMOD Users (Added FlyBase name and description.)
- 18:50, 7 February 2008 (diff | hist) . . (+106) . . m Public Chado Databases (Added outage info.)
- 18:40, 7 February 2008 (diff | hist) . . (+634) . . Public Chado Databases (Added connection information for FlyBase Chado.)
- 16:20, 16 January 2008 (diff | hist) . . (+469) . . Citrina (Added status info.)
- 18:12, 12 November 2007 (diff | hist) . . (+1,560) . . XORT Dumper HOWTO (Added info on setting up server and installing XORT.)
- 20:56, 8 November 2007 (diff | hist) . . (-1) . . m PostgreSQL Performance Tips (→Auto vacuuming: fixed typo)
- 20:51, 8 November 2007 (diff | hist) . . (+380) . . PostgreSQL Performance Tips (Added a stub section on auto vacuuming.)
- 20:41, 8 November 2007 (diff | hist) . . (+452) . . PostgreSQL Performance Tips (→Database initialization: Clarified the encoding paramter to initdb.)
- 19:41, 8 November 2007 (diff | hist) . . (+77) . . m PostgreSQL Performance Tips (→General Tips: Added a link to a useful checklist.)
- 19:38, 8 November 2007 (diff | hist) . . (+78) . . m PostgreSQL Performance Tips (→General Tips: Added one more link.)
- 19:25, 8 November 2007 (diff | hist) . . (+4,611) . . PostgreSQL Performance Tips (Added some detailed information about postgresql options.)
- 16:46, 7 November 2007 (diff | hist) . . (+1,273) . . PostgreSQL Performance Tips (Added more information.)
- 04:53, 7 November 2007 (diff | hist) . . (+1,956) . . PostgreSQL Performance Tips (Added initdb info.)
- 22:08, 6 November 2007 (diff | hist) . . (+246) . . N PostgreSQL Performance Tips (Added a page for postgresql performance tips. Saving to work on it later, no info yet.)
- 21:49, 6 November 2007 (diff | hist) . . (+220) . . Chado Comparative Schema (Added link to FlyBase info.)
- 21:32, 6 November 2007 (diff | hist) . . (+11) . . FlyBase Comparative Genomics Data
- 21:18, 6 November 2007 (diff | hist) . . (+18) . . m FlyBase Comparative Genomics Data
- 21:17, 6 November 2007 (diff | hist) . . (+5,425) . . N FlyBase Comparative Genomics Data (Added information from FlyBase (Peili) about how to implement comparative genomics data in Chado.)
- 21:14, 6 November 2007 (diff | hist) . . (0) . . N File:Genome comparison syntenic region.jpg (current)
- 21:08, 6 November 2007 (diff | hist) . . (0) . . N File:Genome comparison orthology relationship.jpg (current)
- 21:00, 6 November 2007 (diff | hist) . . (0) . . N File:Genome comparison orthologous region.jpg (current)
- 15:43, 2 November 2007 (diff | hist) . . (+152) . . N User:Jogoodma (New page: Josh Goodman is a developer for [http://flybase.org/ FlyBase] at [http://iub.edu Indiana University] in [http://bloomingpedia.org Bloomington, Indiana].) (current)
- 15:37, 2 November 2007 (diff | hist) . . (+63) . . November 2007 GMOD Meeting (→Attendees)
- 20:20, 8 October 2007 (diff | hist) . . (+530) . . N XORT Dumper HOWTO (Added initial structure for the XORT dumping HOWTO.)
- 17:17, 8 August 2007 (diff | hist) . . (+29) . . November 2007 GMOD Meeting
- 16:00, 19 July 2007 (diff | hist) . . (+300) . . m Hackathon 2007 info (→Driving)
- 15:29, 19 July 2007 (diff | hist) . . (0) . . m Hackathon 2007 info (→Attendees)