Difference between revisions of "Satellite Meetings - GMOD Europe 2010"

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| rowspan="1" | [[File:Sept2010MtgLogo300.png|220px|link=September 2010 GMOD Meeting|September 2010 GMOD Meeting]]
 
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<div style="font-size: 200%; line-height: 120%"><b>Satellite Meetings</b><br /><br /></div>
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<div style="font-size: 200%; line-height: 120%"><b>Satellite Meetings</b><br /></div>
<div style="font-size: 140%; line-height: 120%">[[September 2010 GMOD Meeting]]<br />15 September 2010<br />Cambridge, UK</div>
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| rowspan="2" align="center" | {{#icon: GMOD2010Europe300.png|Part of GMOD Europe 2010|200px|GMOD Europe 2010}}
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* [[Post Reference Genome Tools]]
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* [[Community Annotation - September 2010 Satellite|Community Annotation]]
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<br />[[September 2010 GMOD Meeting]]<br />15 September 2010<br />Cambridge, UK</div>
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| rowspan="2" align="center" | [[File:GMOD2010Europe300.png|200px|link=GMOD Europe 2010|Part of GMOD Europe 2010]]
 
<div style="font-size: 110%;">[[GMOD Europe 2010|Part of GMOD Europe 2010]]</div>
 
<div style="font-size: 110%;">[[GMOD Europe 2010|Part of GMOD Europe 2010]]</div>
 
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__NOTITLE__
 
  
  
  
The [[January 2010 GMOD Meeting#Satellite Meetings|Satellite Meetings]] at the [[January 2010 GMOD Meeting]] proved so popular that we are holding them again, this time the day after the meeting, and immediately before [http://meetings.cshl.edu/meetings/infouk10.shtml Genome Informatics 2010].
 
  
If you have a topic that you want to cover in a Satellite Meeting, please
+
The [[January 2010 GMOD Meeting#Satellite Meetings|Satellite Meetings]] at the [[January 2010 GMOD Meeting]] proved so popular that we decided to hold them again.
# Add the topic to the list below.  Be sure to include your contact information.
+
# Send an email about the satellite to the appropriate [[GMOD Mailing Lists]].
+
  
All satellite meetings will conclude in time for participatns to make it to the start of Genome Informatics on Wednesday night.
 
  
GMOD staff will promote the satellite meetings in any announcements that go out.
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{{TocRight}}
  
{| class="wikitable"
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== Satellite Topics ==
! Topic
+
 
! Organizer(s)
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We discussed
! Time
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* ''[[Post Reference Genome Tools]]'' in the morning session, and
! Comments
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* ''[[Community Annotation - September 2010 Satellite|Community Annotation]]'' in the afternoon.
 +
 
 +
There is a nice [http://blog.openhelix.eu/?p=5551 writeup of these summaries] by Mary Mangan on the [http://blog.openhelix.eu/ OpenHelix blog].
 +
 
 +
== Participants ==
 +
 
 +
{| class="wikitable sortable"
 +
! Participant
 +
! Affilliation(s)
 +
! URL
 
|-
 
|-
! Post Reference Genome Tools
 
 
| [[User:Clements|Dave Clements]]
 
| [[User:Clements|Dave Clements]]
| To be determined
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| NESCent, GMOD
| How are we going to visualize and exploit (or even cope with) the world three years from now, when small labs may be able to fully sequence, for example, 500 individuals or species in in a month?  How can we visualize and link together 500, 1000, or 10,000 genomes?  Many existing tools assume a ''reference'' genome. Will a reference make sense in the future, or will it hold us back?
+
| http://nescent.org http://gmod.org
 
|-
 
|-
! Your Idea Here
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| Fengyuan Hu
| Your name here
+
| Department of Genetics, University of Cambridge
| time
+
|
| Your powerful argument why people should spend time at this satellite.
+
|-
 +
| Ellen Adlem
 +
| Cambridge University Cambridge Institue of Medical Research
 +
| http://www.t1dbase.org
 +
|-
 +
| seth redmond
 +
| Imperial College / Vectorbase
 +
|
 +
|-
 +
| [[User:Chemmeri|Chris Hemmerich]]
 +
|
 +
| http://cgb.indiana.edu
 +
|-
 +
| Jerven Bolleman
 +
| UniProt Swiss-Prot
 +
|
 +
|-
 +
| Oksana Riba Grognuz
 +
| Swiss Institute of Bioinformatics (SIB) Department of Ecology and Evolution, University of Lausanne
 +
|
 +
|-
 +
| Kim Rutherford
 +
| Cambridge Systems Biology Centre
 +
| http://www.pombase.org/
 +
|-
 +
| Stephen Taylor
 +
| CBRG, Oxford University
 +
| http://www.cbrg.ox.ac.uk/
 +
|-
 +
| [[User:Scott|Scott Cain]]
 +
| OICR
 +
| http://gmod.org/
 +
|-
 +
| Gerd Anders
 +
| Public research institute: Max-Delbrueck-Centrum Berlin (MDC), Researcher and database developer
 +
| http://www.mdc-berlin.de/en/research/core_facilities/cf_massspectromety_bimsb/teammember/index.html http://www.mdc-berlin.de/en/research/core_facilities/cf_bioinformatic/teammember/index.html
 
|}
 
|}
  
If you are interested in participating in any of these satellites, please
+
== Sponsors ==
# check the '''Satellite Meetings'' box on the [[GMOD Europe 2010#Registration|GMOD Europe 2010 registration form]], and
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# notify the organizer that you are interested in participating.
+
  
== Registration ==
+
[[File:CCBILogo.png|150px|left|link=http://www.ccbi.cam.ac.uk/|Cambridge Computational Biology Institute]]
 +
[[File:CambridgeWide.gif|190px|right|link=http://www.biomed.cam.ac.uk/gradschool/skills/bioinformatics.html|School of Biological Sciences Bioinformatics Training Facility]]
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This event was sponsored by the [http://www.ccbi.cam.ac.uk/ Cambridge Computational Biology Institute] and the [http://www.biomed.cam.ac.uk/gradschool/skills/bioinformatics.html School of Biological Sciences Bioinformatics Training Facility].  The [http://www.ccbi.cam.ac.uk/ CCBI] is set up to bring together the unique strengths of Cambridge in medicine, biology, mathematics and the physical sciences. Its aim is to create a centre of excellence in research and teaching and to promote collaborations both within the Cambridge area and beyond.  The [http://www.biomed.cam.ac.uk/gradschool/skills/bioinformatics.html Bioinformatics Training Facility] organises practical training for both undergraduates and postgraduates.  The vast majority of their [http://www.biomed.cam.ac.uk/gradschool/skills/bioinformatics.html postgraduate events] are open and free to all
 +
who might benefit.
  
Registration is free, but required, as space is limited.  Please see the [[GMOD Europe 2010#Registration|GMOD Europe 2010 page]] for a link to the registration form.  You may register for multiple events, or just the satellite meetings.
+
CCBI provided copious organizational and logistical support for this event.  The Bioinformatics Training Facility is generously providing all coffee, tea, and break snacks at no charge.  Please thank Gos Micklem, [[User:Rsmith|Richard Smith]], Shelley Lawson, and Dave Judge profusely every time you see them.
  
 
== Lodging and Other Logistics ==
 
== Lodging and Other Logistics ==
  
 
See the [[GMOD Europe 2010#Logistics|Logistics section]] on the GMOD Europe 2010 page for information.
 
See the [[GMOD Europe 2010#Logistics|Logistics section]] on the GMOD Europe 2010 page for information.
 +
 +
== Registration ==
 +
 +
Registration was free, but required, as space was limited.
  
 
[[Category:Meetings]]
 
[[Category:Meetings]]

Latest revision as of 18:55, 8 October 2012

September 2010 GMOD Meeting
Satellite Meetings
Part of GMOD Europe 2010



The Satellite Meetings at the January 2010 GMOD Meeting proved so popular that we decided to hold them again.


Satellite Topics

We discussed

There is a nice writeup of these summaries by Mary Mangan on the OpenHelix blog.

Participants

Participant Affilliation(s) URL
Dave Clements NESCent, GMOD http://nescent.org http://gmod.org
Fengyuan Hu Department of Genetics, University of Cambridge
Ellen Adlem Cambridge University Cambridge Institue of Medical Research http://www.t1dbase.org
seth redmond Imperial College / Vectorbase
Chris Hemmerich http://cgb.indiana.edu
Jerven Bolleman UniProt Swiss-Prot
Oksana Riba Grognuz Swiss Institute of Bioinformatics (SIB) Department of Ecology and Evolution, University of Lausanne
Kim Rutherford Cambridge Systems Biology Centre http://www.pombase.org/
Stephen Taylor CBRG, Oxford University http://www.cbrg.ox.ac.uk/
Scott Cain OICR http://gmod.org/
Gerd Anders Public research institute: Max-Delbrueck-Centrum Berlin (MDC), Researcher and database developer http://www.mdc-berlin.de/en/research/core_facilities/cf_massspectromety_bimsb/teammember/index.html http://www.mdc-berlin.de/en/research/core_facilities/cf_bioinformatic/teammember/index.html

Sponsors

Cambridge Computational Biology Institute
School of Biological Sciences Bioinformatics Training Facility

This event was sponsored by the Cambridge Computational Biology Institute and the School of Biological Sciences Bioinformatics Training Facility. The CCBI is set up to bring together the unique strengths of Cambridge in medicine, biology, mathematics and the physical sciences. Its aim is to create a centre of excellence in research and teaching and to promote collaborations both within the Cambridge area and beyond. The Bioinformatics Training Facility organises practical training for both undergraduates and postgraduates. The vast majority of their postgraduate events are open and free to all who might benefit.

CCBI provided copious organizational and logistical support for this event. The Bioinformatics Training Facility is generously providing all coffee, tea, and break snacks at no charge. Please thank Gos Micklem, Richard Smith, Shelley Lawson, and Dave Judge profusely every time you see them.

Lodging and Other Logistics

See the Logistics section on the GMOD Europe 2010 page for information.

Registration

Registration was free, but required, as space was limited.