PAG 2015

From GMOD
Revision as of 19:12, 16 December 2014 by Clements (Talk | contribs)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Plant and Animal Genomes 2015 (PAG XXIII

There is plenty of GMOD content at the Plant and Animal Genomes (PAG) conference in January 2015. There is a dedicated GMOD Workshop and also posters and presentations from many GMOD users, as well as from developers of GMOD tools.

Core GMOD Content

There are a number of items focussed on the tools and services that GMOD provides. These are:

Date Time Session Topic Presenter Location
Jan. 11 (Sun) 4:00-4:30 Tripal Database Network and Initiatives W872: Tripal Overview & Future Developments Stephen Ficklin Tripal California Room
4:30 - 5:00 W873: Extending Tripal for Specialized Display and Management of Diversity and Breeding Data Lacey-Anne Sanderson
5:00 - 5:15 W874: GDR/CottonGen: Converting Legacy Sites to Tripal Sook Jung
5:15 - 5:30 W875: The i5k Workspace@Nal - a Tripal Based Arthropod Genome Portal Christopher Childers
5:30 - 5:45 W876: Tripal within the Arabidopsis Information Portal (AIP) Vivek Krishnakumar
5:45 - 6:00 W977: Tripal within the Legumes Genomics Community Ethalinda Cannon
6:00 - 6:10 W878: The Hardwood Genomics Database: Current Status and Future Directions after Four Years of Development Margaret Staton
Jan. 10 (Sat.) 4:00 - 6:10 Next Generation Genome Annotation and Analysis Towne MAKER


GMOD Workshop

The GMOD workshop on Wednesday January 14th will be held in the Golden West room. The schedule is:

10:30 - 10-50 W407 - The Future of GMOD and Chado Scott Cain
10:50 - 11:10 W408 - KnowPulse: A Breeder-Focused Web Portal That Integrates Genetics and Genomics of Pulse Crops with Model Genomes Lacey-Anne Sanderson
11:10 - 11:30 W409 - Phytozome Population Diversity Visualization in JBrowse: A very large Dataset Case Study Richard Hayes
11:30 - 11:50 W410 - JBrowse within the Arabidopsis Information Portal (AIP) Project Vivek Krishnakumar
11:50 - 12:10 W411 - Apollo + i5K: Collaborative Curation and Interactive Analysis of Genomes Monica Munoz-Torres
12:10 - 12:30 W412 - The Teosinte (Zea mays ssp. parviglumis) de novo Genome Assembly Arun S. Seetharam
12:30 - 1:30 Lunch Break
1:30 PM Panel Discussion TBD

GMOD Consumers and Providers

There are also many groups who use GMOD components showing posters, and giving presentations and workshops; here is a small selection:

EVEN ODD
Date Event Details Presenter Location
Saturday January 10
Sunday January 11
1:30 - 1:50 W311 - TreeGenes: A Comprehensive Resource for Forest Tree Genomics Emily Grau Sunrise
2:30- 2:50 W421 - Overview of the GnpIS Grape Genomics and Genetic Integrative Resource for Diversity Studies Nacer Mohellibi Pacific Salon 6-7
Monday January 12
10:00 - 11:30 P400: Data Integration for the Plant Research Community: The Arabidopsis Information Portal Chia-Yi Cheng Poster session
10:00 - 11:30 P402: Developing Content for the Arabidopsis Information Portal Matt Vaughn Poster session
10:00 - 11:30 [ P]: Poster session
10:00 - 11:30 [ P]: Poster session
10:00 - 11:30 [ P]: Poster session
10:00 - 11:30 [ P]: Poster session
10:00 - 11:30 [ P]: Poster session
3:00 - 4:30 #P: [ ] Poster session
3:00 - 4:30 #P: [ ] Poster session
3:00 - 4:30 #P: [ ] Poster session
3:00 - 4:30 #P: [ ] Poster session
3:00 - 4:30 #P: [ ] Poster session
3:00 - 4:30 #P: [ ] Poster session
3:00 - 4:30 #P: [ ] Poster session
3:00 - 4:30 #P: [ ] Poster session
Tuesday January 13
11:30 - 11:45 C19: TreeGenes and CartograTree: Tools for Forest Tree Genomics Emily Grau California Room
4:00 pm - 6:10 [Galaxy for NGS Data Analysis: A Hands-on Workshop Dave Clements California Room
Wednesday January 14
10:30 - 2:30 GMOD Workshop]] Golden West