Difference between revisions of "PAG 2013"

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(What's happening at PAG 2013)
 
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[[File:PAG-2013.jpg|right|link=http://www.intlpag.org/2013/|Plant and Animal Genomes conference, aka PAG XXI]]
 
[[File:PAG-2013.jpg|right|link=http://www.intlpag.org/2013/|Plant and Animal Genomes conference, aka PAG XXI]]
GMOD will be out in force at the [http://www.intlpag.org/2013/ Plant and Animal Genomes (PAG)] conference later this month. GMOD content includes:
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GMOD will be out in force at the [http://www.intlpag.org/2013/ Plant and Animal Genomes (PAG)] conference later this month.
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==Core GMOD Content==
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There will be a number of items focussed on the tools and services that GMOD provides. These are:
  
 
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| Wed. Jan. 16  || 10:20 am - 5:00 pm  || 1537 || [http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=1CA0 GMOD] ||  Workshop
 
| Wed. Jan. 16  || 10:20 am - 5:00 pm  || 1537 || [http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=1CA0 GMOD] ||  Workshop
 
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|}
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==All Day GMOD Workshop==
  
 
[http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=1CA0 The GMOD workshop] on Wednesday January 16th will be held in the Golden West room from 10:20 until 5pm, and has the follow schedule:
 
[http://pag13.mapyourshow.com/5_0/sessions/sessiondetails.cfm?ScheduledSessionID=1CA0 The GMOD workshop] on Wednesday January 16th will be held in the Golden West room from 10:20 until 5pm, and has the follow schedule:
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| 3:45 PM - 4:25 PM || [[Galaxy]] Update 2013
 
| 3:45 PM - 4:25 PM || [[Galaxy]] Update 2013
 
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|}
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==GMOD Consumers and Providers==
  
 
There will also be many groups who use GMOD components showing posters, and giving presentations and workshops; here is a small selection:
 
There will also be many groups who use GMOD components showing posters, and giving presentations and workshops; here is a small selection:

Revision as of 20:38, 3 January 2013

Plant and Animal Genomes conference, aka PAG XXI

GMOD will be out in force at the Plant and Animal Genomes (PAG) conference later this month.

Core GMOD Content

There will be a number of items focussed on the tools and services that GMOD provides. These are:

Date Time ID Session Type
Sun. Jan. 13 1:30 pm - 3:40 pm 1530 Generic Genome Browser Workshop
Mon. Jan. 14 10:00 am - 11:30 am P0984 Using GMOD to Annotate and Distribute Data in the Cloud Poster
Mon. Jan. 14 3:00 pm - 4:30 pm P0967 WebApollo: A Web-based Sequence Annotation Editor for Distributed Community Annotation Poster
Wed. Jan. 16 10:20 am - 5:00 pm 1537 GMOD Workshop

All Day GMOD Workshop

The GMOD workshop on Wednesday January 16th will be held in the Golden West room from 10:20 until 5pm, and has the follow schedule:

10:30 AM - 11:10 AM GMOD: A User's Perspective
11:10 AM - 11:50 AM MAKER
11:50 AM - 12:30 PM Tripal: a Toolkit for Construction of Genomic and Genetic Websites Using Chado and Drupal
1:30 PM - 2:10 PM GBrowse_syn: Using the Generic Synteny Browser
2:10 PM - 2:50 PM JBrowse: A Next-Generation Genome Browser
3:05 PM - 3:45 PM WebApollo: A Web-based Sequence Annotation Editor for Distributed Community Annotation
3:45 PM - 4:25 PM Galaxy Update 2013

GMOD Consumers and Providers

There will also be many groups who use GMOD components showing posters, and giving presentations and workshops; here is a small selection:

12 Jan. (Sat.) 1:30 pm - 3:40 pm 1500 Citrus Genome Workshops
12 Jan. (Sat.) 1:30 pm - 3:40 pm 1508 Cool Season Legumes Workshops
12 Jan. (Sat.) 1:30 pm - 3:40 pm 1549 Maize Workshops
12 Jan. (Sat.) 3:50 pm - 6:00 pm 1488 Bioenergy Grass Genomics Workshops
12 Jan. (Sat.) 3:50 pm - 6:00 pm 1531 The Genetic Landscape of Wheat Rusts Workshops
12 Jan. (Sat.) 3:50 pm - 6:00 pm 1659 Next Generation Genome Annotation and Analysis Workshops
12 Jan. (Sat.) 8:00 am - 6:00 pm 1570 Poultry 1 Workshops
12 Jan. (Sat.) 8:00 am - 10:10 am 1596 Applications of Ontologies to Plant and Animal Genomics Workshops
12 Jan. (Sat.) 8:00 am - 12:30 pm 1497 Cattle/Swine Workshops
12 Jan. (Sat.) 8:00 am - 12:30 pm 1560 Pine Genome Reference Sequence Workshops
12 Jan. (Sat.) 10:20 am - 12:30 pm 1484 Arthropod Genomics Workshops
12 Jan. (Sat.) 10:20 am - 12:30 pm 1691 Managing Crop Phenotype Data Workshops
12 Jan. (Sat.) 10:20 am - 12:30 pm 1767 DNA Subway: Genomics, DNA Barcoding, and RNA-Seq - Bringing Cutting-Edge Biology into the Classroom Workshops
13 Jan. (Sun.) 3:50 pm - 6:00 pm 1509 Cotton Genome Initiative Workshops
13 Jan. (Sun.) 3:50 pm - 6:00 pm 1700 Computer Demos 2 - Software Computer Demonstrations
13 Jan. (Sun.) 8:00 am - 12:30 pm 1514 Genome annotation resources at the EBI Workshops
13 Jan. (Sun.) 8:00 am - 12:30 pm 1588 Sugar Cane (ICSB) Workshops
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0055 Genome Sequencing and Analysis in Traditional Chinese Medicine Ganoderma sinense Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0059 Phylogenetic Analyses of Citrus LRR-RLKs Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0223 Genetic Variation Across Australian Bread Wheat Varieties Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0357 QTLs and Comparative Genomics Highlight Candidate Genes for Important Cowpea Traits Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0409 Status of the Draft Potato Ontology Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0621 Whole-Genome Genotyping for Detecting Mutations in the Genes that are Directly Responsible for the Trait Variation Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0763 Analysis of B. taurus and B. indicus Admixture in Uganda as Revealed by the Illumina BovineSNP50 Genotyping BeadChip. Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0953 CottonGen: An Integrated Web-Database for Cotton Genomics, Genetics and Breeding Research Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0957 Annotation of Livestock and Aquaculture species in Ensembl Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0961 Hymenoptera Genome Database: Resources for Annotating and Comparing Hymenopteran Insect Genomes Posters
14 Jan. (Mon.) 3:00 pm - 4:30 pm P0985 GenSAS: Genome Sequence Annotation Server, a Tool for Online Annotation and Curation Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0044 Sequencing the Genomes of Cultivated Lactuca sativa and its Wild Progenitor, L. serriola Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0058 Genomic Analysis of the Upstream Sequences of Limonene Synthase Genes in Sweet Orange Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0132 Imputation of Microsatellite Alleles from Dense SNP Genotypes for Parentage Verification Across Multiple Bos taurus and Bos indicus breeds Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0326 Using SoyBase Tools to Identify Genes Potentially Involved in Quantitative Traits: the Soybean bZIP1 Transcription Factor and Water Use Efficiency Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0342 Gene Expression Atlas for Common Bean Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0358 Modern Breeding of Cowpea (Vigna unguiculata L. Walp.) in sub-Saharan Africa Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0458 Genomics Resources for North American Hardwoods Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0504 Genome Annotation and Comparison of Two Pacific Rockfishes Differing in Longevity Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0928 A Model Organism Database for Phytozome Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0948 Bioinformatic Solutions in Forest Genomics: Accessing the TreeGenes Database Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0952 The Legume Information System 2013 Posters
14 Jan. (Mon.) 10:00 am - 11:30 am P0954 Liverwort Genome Analysis using DDBJ Pipeline and Construction of the Genome Annotation Database Posters
14 Jan. (Mon.) 12:50 pm - 3:00 pm 1701 Computer Demos 3 - Crop Databases Computer Demonstrations
15 Jan. (Tue.) 3:50 pm - 6:00 pm 1495 Cassava Genomics Workshops