Difference between revisions of "Main Page"

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   - News: List from GMOD News page.  This is currently manually maintained
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   - News: List from GMOD News RSS feed, defined on GMOD News page.   
   -    but will switch to automatic means shortly.
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   -    Lists first 9 news items
 
   - New & Revised pages: Automatically populated from Special:Recentchanges.   
 
   - New & Revised pages: Automatically populated from Special:Recentchanges.   
   -    This EXCLUDES minor edits.   
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   -    Lists last 10 changes/additions and EXCLUDES minor edits.   
 
   - Popular GMOD Tools: This list changes slowly and is manually maintained  
 
   - Popular GMOD Tools: This list changes slowly and is manually maintained  
 
   -    by the GMOD help desk.
 
   -    by the GMOD help desk.
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[[GMOD News#Modware Feedback Wanted|Modware Feedback Wanted]]
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<br />[[GMOD News#November 2007 GMOD Meeting|November 2007 GMOD Meeting]]
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<br />[[GMOD News#GMODTools 1.1 Released|GMODTools 1.1 Released]]
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<br />[[GMOD News#GMOD Help Desk is Back|GMOD Help Desk is Back]]
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<br />[[GMOD News#FlyBase Converts to Chado|FlyBase Converts to Chado]]
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<br />[[GMOD News#Pathway Tools 11.5 Released|Pathway Tools 11.5 Released]]
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<br />[[GMOD News#ISMB/Bioinformatics Chado Paper|ISMB/Bioinformatics Chado Paper]]
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<br />[[GMOD News#BioMart 0.6 Released|BioMart 0.6 Released]]
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<br />[[GMOD News#GBrowse 1.68 Released|GBrowse 1.68 Released]]
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| '''New &amp; Revised Pages'''
 
| '''New &amp; Revised Pages'''

Revision as of 23:44, 18 December 2007

Welcome to GMOD

GMOD News RSSIcon16x16.gif
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New & Revised Pages

GSOC Project Ideas 2024News/Prospecting for Proposals for GSoC 2024GSoCGSOC Applications GuideSource Code RepositoriesJBrowse2 Tutorial PAG 2024PAG2023 bash scriptPAG2024 bash scriptSeven Knights Idle Adventure Unlimited Rubies GeneratorMogul Cloud Cheats Latest Version 2023 New Generator Gems (Unique)

Popular GMOD Tools

Genome Browsing and Editing
  Apollo: Genome annotation editor
  GBrowse: Genome annotation viewer
Comparative Maps
  CMap: Comparative map viewer
  Sybil: Comparative genome viewer
Database Tools
  Chado: Biological database schema
  BioMart: Data mining system
  GMODTools: Chado to Fasta, GFF, ...
Biological Pathways
  Pathway Tools: Metabolic, regulatory
Infrastructure
  GMODWeb: Website for Chado DBs
  Modware: Middleware for Chado

GMOD is the Generic Model Organism Database project, a collection of open source software tools for creating and managing genome-scale biological databases. You can use it to create a small laboratory database of genome annotations, or a large web-accessible community database. GMOD tools are in use at many large and small community databases.

How do I Get Started?

For a project overview see GMOD for the Biologist. For an introduction to specific GMOD components see the list of the most popular tools at the right, or visit GMOD Components for a comprehensive list of GMOD tools.

How do I Get Support?

GMOD support is available from several different sources. Finding Support introduces each support option (this web site, GMOD Mailing Lists, and the GMOD Help Desk) and offers guidance on which one is the most appropriate for your question.

How do I Get Involved?

As an open source project GMOD relies on the donation of time and software by groups and individuals. Contribution of new tools, adoption of existing ones, and improving the documentation are all welcome. Existing and potential users are encouraged to provide feedback via mailing lists or the help desk. The GMOD Project Page lists projects in need of ideas and developers.

You can also attend project meetings. See November 2007 GMOD Meeting and Hackathon 2007 info for summaries of the two most recent meetings.

Contributing Organizations

FlyBaseMainPageIcon.png   Wdb_small.gif WFleaBaseMainPageIcon.png   GrameneMainPageIcon.jpg     TAIR_logo.gif NESCentMainPageIcon.png SGD-t.gif MgiMainPageLogo.jpg DictyMainPageLogo.png   RgdMainPageIcon.gif   BioCycMainPageLogo.gif   InfinityPlanaria58x72.png    Ecoliwiki.png   ParameciumDBIcon133x42.png