Difference between revisions of "Main Page"

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[[GMOD_News#BioPerl Podcast|BioPerl Podcast]]<br />
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[[GMOD_News#InterMine 0.92 Released|InterMine 0.92 Released]]<br />
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[[GMOD_News#CMap Paper in Bioinformatics|CMap Paper in Bioinformatics]]<br />
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[[GMOD_News#January 2010 GMOD Meeting|January 2010 GMOD Meeting]]<br />
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[[GMOD_News#Long Term Database Funding|Long Term Database Funding]]<br />
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[[GMOD_News#Two Openings at Bayer CropScience|Two Openings at Bayer CropScience]]<br />
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[[GMOD_News#GBrowse NGS Tutorial & Poster|GBrowse NGS Tutorial & Poster]]<br />
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[[GMOD_News#Galaxy Project Hiring|Galaxy Project Hiring]]<br />
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[[GMOD_News#Visualizing Biological Data Workshop|Visualizing Biological Data Workshop]]<br />
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[[GMOD_News#Openings at Syngenta|Openings at Syngenta]]
 
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| '''[[Special:Recentchanges|New &amp; Revised Pages]]'''  {{#icon: RSSIcon16x16.gif|All recent changes feed||http://gmod.org/w/index.php?title=Special:Recentchanges&feed=rss}}
 
| '''[[Special:Recentchanges|New &amp; Revised Pages]]'''  {{#icon: RSSIcon16x16.gif|All recent changes feed||http://gmod.org/w/index.php?title=Special:Recentchanges&feed=rss}}

Revision as of 06:05, 3 December 2009

{{#icon: Jan2010MtgLogo170.png|January 2010 GMOD Meeting|150|January 2010 GMOD Meeting}}

Registration Now Open

GMOD News {{#icon: RSSIcon16x16.gif|GMOD News Feed http://gmod.org/w/index.php?title=GMOD_News&action=feed&feed=rss}}

BioPerl Podcast
InterMine 0.92 Released
CMap Paper in Bioinformatics
January 2010 GMOD Meeting
Long Term Database Funding
Two Openings at Bayer CropScience
GBrowse NGS Tutorial & Poster
Galaxy Project Hiring
Visualizing Biological Data Workshop
Openings at Syngenta

New & Revised Pages {{#icon: RSSIcon16x16.gif|All recent changes feed http://gmod.org/w/index.php?title=Special:Recentchanges&feed=rss}}

GSOC Project Ideas 2024News/Prospecting for Proposals for GSoC 2024GSoCGSOC Applications GuideSource Code RepositoriesJBrowse2 Tutorial PAG 2024PAG2023 bash scriptPAG2024 bash scriptSeven Knights Idle Adventure Unlimited Rubies GeneratorMogul Cloud Cheats Latest Version 2023 New Generator Gems (Unique)

Popular GMOD Tools

Genome Browsing and Editing
  GBrowse: Genome annotation viewer
  Apollo: Genome annotation editor
Comparative Genomics
  CMap: Comparative map viewer
  GBrowse_syn: Synteny viewer
Database Tools
  Chado: Biological database schema
  BioMart: Data mining system
  GMODTools: Chado to Fasta, GFF, ...
  InterMine: Data warehousing
Biological Pathways
  Pathway Tools: Metabolic, regulatory
Publication Curation
  Textpresso: text mining

Welcome to GMOD

GMOD is the Generic Model Organism Database project, a collection of open source software tools for creating and managing genome-scale biological databases. You can use it to create a small laboratory database of genome annotations, or a large web-accessible community database. GMOD tools are in use at many large and small community databases.

How do I Get Started?

See Overview for the big picture. For an introduction to specific GMOD components see the list of the most popular tools at the right, or visit GMOD Components for a comprehensive list of GMOD tools. If GMOD looks promising for your needs, consider attending the next GMOD community meeting.

How do I Get Support?

GMOD support is available from several different sources. Support introduces each support option (this web site, GMOD Mailing Lists, Training and Outreach activities, and the GMOD Help Desk) and offers guidance on which one is the most appropriate for your question.

How do I Get Involved?

As an open source project GMOD relies on the donation of time and software by groups and individuals. Contribution of new tools, adoption of existing ones, and improving the documentation are all welcome. Existing and potential users are encouraged to provide feedback via mailing lists or the help desk. The GMOD Project Page lists projects in need of ideas and developers. You can also attend project meetings. The next meeting is the January 2010 GMOD Meeting in San Diego, following Plant and Animal Genome.

Contributing Organizations

{{#icon: FlyBaseMainPageIcon.png|FlyBase||http://www.flybase.org/}} &nbsp; {{#icon: Wdb_small.gif|WormBase||http://www.wormbase.org/}} {{#icon: WFleaBaseMainPageIcon.png|wFleaBase||http://wfleabase.org/}} &nbsp; {{#icon: CSHL_Logo75x75.gif|CSHL||http://www.cshl.edu/}}  &nbsp; {{#icon: GrameneMainPageIcon.jpg|Gramene||http://www.gramene.org/}}   &nbsp; {{#icon: TAIR_logo.gif|TAIR||http://www.arabidopsis.org/}} {{#icon: NESCentMainPageIcon.png|NESCent||http://www.nescent.org/}} {{#icon: SGD-t.gif|SGD||http://www.yeastgenome.org/}} {{#icon: MgiMainPageLogo.jpg|MGI||http://www.informatics.jax.org/}} {{#icon: DictyMainPageLogo.png|DictyBase||http://dictybase.org/}} &nbsp; {{#icon: RgdMainPageIcon.gif|RGD||http://rgd.mcw.edu/}} &nbsp; {{#icon: BioCycMainPageLogo.gif|BioCyc||http://www.biocyc.org/}} &nbsp; {{#icon: InfinityPlanaria58x72.png|SmedGD||http://smedgd.neuro.utah.edu/}}  &nbsp; {{#icon: Ecoliwiki.png|EcoliWiki||http://ecoliwiki.net/}} &nbsp; {{#icon: ParameciumDBIcon133x42.png|ParameciumDB||http://paramecium.cgm.cnrs-gif.fr/}} {{#icon: Sgn small tag.png|SGN||http://www.sgn.cornell.edu/}} {{#icon: OICRlogo.png|OICR||http://www.oicr.on.ca/}} &nbsp; {{#icon: CUGILogoHomePage.png|CUGI||http://www.genome.clemson.edu/}}