Difference between revisions of "Jim's installation notes"
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*** [http://www.pgadmin.org/ pgAdmin] is a GUI desktop app. I have this but haven't figured out how to do anything useful with it. | *** [http://www.pgadmin.org/ pgAdmin] is a GUI desktop app. I have this but haven't figured out how to do anything useful with it. | ||
*** [http://phppgadmin.sourceforge.net/ phppgadmin] web based admin tool analogous to [http://www.phpmyadmin.net/ phpmyadmin] for mysql | *** [http://phppgadmin.sourceforge.net/ phppgadmin] web based admin tool analogous to [http://www.phpmyadmin.net/ phpmyadmin] for mysql | ||
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| + | ==== Apache ==== | ||
| + | Comes installed on OS X | ||
| + | |||
| + | ==== BioPerl ==== | ||
| + | BioPerl is currently not installed on my laptop, as I ran into the dreaded gd installation problems. Let's try again. | ||
| + | [http://www.bioperl.org/wiki/Installing_Bioperl_for_Unix Installing BioPerl on Unix] applies to Mac OSX once the prereqs are done (I think). Some incomplete notes [http://dimer.tamu.edu/simplog/archive.php?blogid=1&pid=3535 here] from installing on the server. As I recall, this failed the last time I tried on my laptop. However, I think Matías Giovannini updated his [http://www.paginar.net/matias/articles/gd_x_howto.html Installation guide for gd] since the last time I tried it. | ||
Revision as of 20:32, 8 March 2007
Back to Chado New Users
Installation on PPC mac
- First do this on my G4 laptop. Then consider whether to install on the XServe.
Installation section of Getting Started describes how to get Chado from CVS. Note, when updating, be sure to be at the directory level just above schema. Getting Started refers to the INSTALL document
Prerequisites
PostgreSQL
- I installed PostgreSQL using the Installer Package from Marc Liyanage
- There are a couple of tools to make working with PostgreSQL easier
- pgAdmin is a GUI desktop app. I have this but haven't figured out how to do anything useful with it.
- phppgadmin web based admin tool analogous to phpmyadmin for mysql
- There are a couple of tools to make working with PostgreSQL easier
Apache
Comes installed on OS X
BioPerl
BioPerl is currently not installed on my laptop, as I ran into the dreaded gd installation problems. Let's try again. Installing BioPerl on Unix applies to Mac OSX once the prereqs are done (I think). Some incomplete notes here from installing on the server. As I recall, this failed the last time I tried on my laptop. However, I think Matías Giovannini updated his Installation guide for gd since the last time I tried it.
