View source for JBrowse2

{{Tool data
|name=JBrowse 2
|full name=
|status=mature
|dev=active
|support=active
|type=Genome visualization
|platform=web
|about=JBrowse 2 is a multi-modal genome browser that can view data in linear, circular, dotplot, and syntenic modes, in order to better serve the needs of structural variant visualization and comparative genomics. It is coded using React and follows in the footsteps of JBrowse 1 in being highly pluggable. Users can write plugins to create custom data adapters, track types, and even entirely new view types. See https://jbrowse.org/jb2/ for more info
|open source=Yes
|licence=[https://opensource.org/licenses/Apache-2.0 Apache 2]
|input data type=
|input=[[GFF3]], Indexed FASTA, BigWig, BAM, CRAM, VCF/GFF/BED tabixed files, .hic files, and more
|output=
|language=Javascript, Typescript, React
|audience=public
|release date=2020/11
|use template=Yes
|logo=Jbrowse2_logo.png
|screenshot=
|contact=
|mail=Open a discussion or issue on our github page at https://github.com/GMOD/jbrowse-components or log into our chat at https://gitter.im/GMOD/jbrowse2 or send email to gmod-ajax@lists.sourceforge.net
|dl=
|dl src=
|papers=
|presentations=
|tutorials=
|getting started preamble=
|req=
|install=
|config=
|doc=
|dev ppl=
|dev ppl=
|dl tracking=
|logo info=
|see also=
|extra={{GitcComponent}}
}}
This page is under active development










<!--

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{{SemanticLink
|linkurl=https://jbrowse.org/jb2/docs/quickstart_web
|linktitle=
|linktype=download
|linkdesc=
}}
{{SemanticLink
|linkurl=http://jbrowse.org
|linktitle=
|linktype=website
|linkdesc=
}}
{{SemanticLink
|linkurl=http://twitter.com/usejbrowse
|linktitle=
|linktype=social media
|linkdesc=
}}
{{SemanticLink
|linkurl=https://github.com/GMOD/jbrowse-components/
|linktitle=
|linktype=source code
|linkdesc=
}}
{{SemanticLink
|linkurl=http://jbrowse.org/demos
|linktitle=JBrowse demos
|linktype=demo server
|linkdesc=
}}
{{SemanticLink
|linkurl=
|linktitle=
|linktype=
|linkdesc=
}}
Available on platform	web +
Has URL	https://jbrowse.org/jb2/docs/quickstart_web +, http://jbrowse.org +, http://twitter.com/usejbrowse +, https://github.com/GMOD/jbrowse-components/ + and http://jbrowse.org/demos +
Has description	JBrowse 2 is a multi-modal genome browser … JBrowse 2 is a multi-modal genome browser that can view data in linear, circular, dotplot, and syntenic modes, in order to better serve the needs of structural variant visualization and comparative genomics. It is coded using React and follows in the footsteps of JBrowse 1 in being highly pluggable. Users can write plugins to create custom data adapters, track types, and even entirely new view types. See https://jbrowse.org/jb2/ for more infoSee https://jbrowse.org/jb2/ for more info +
Has development status	active +
Has input format	GFF3 +, BigWig +, BAM +, Indexed FASTA +, CRAM +, VCF/GFF/BED tabixed files +, .hic files + and and more +
Has licence	Apache 2 +
Has logo	Jbrowse2_logo.png +
Has software maturity status	mature +
Has support status	active +
Has title	JBrowse demos +
Has topic	JBrowse2 +
Is open source	Yes +
Link type	download +, website +, social media +, source code + and demo server +
Release date	November 2020 +
Tool functionality or classification	Genome visualization +
Written in language	Javascript +, Typescript + and React +
Has subobjectThis property is a special property in this wiki.	JBrowse2#https://jbrowse.org/jb2/docs/quickstart_web +, JBrowse2#http://jbrowse.org +, JBrowse2#http://twitter.com/usejbrowse +, JBrowse2#https://github.com/GMOD/jbrowse-components/ +, JBrowse2#http://jbrowse.org/demos + and JBrowse2 +