Difference between revisions of "GMOD Online Training 2014/Schedule"

From GMOD
Jump to: navigation, search
(Schedule)
 
(4 intermediate revisions by 2 users not shown)
Line 16: Line 16:
 
| Day 1, AM/PM || [[GMOD Online Training 2014//SOBA Tutorial|SOBA]] ||  [[User:Bmoore|Barry Moore]] || [http://www.sequenceontology.org Sequence Ontology]<br>
 
| Day 1, AM/PM || [[GMOD Online Training 2014//SOBA Tutorial|SOBA]] ||  [[User:Bmoore|Barry Moore]] || [http://www.sequenceontology.org Sequence Ontology]<br>
 
|-
 
|-
| Day 1, PM || [[GMOD Online Training 2014/MAKER Tutorial|MAKER]] ||  [[User:Bmoore|Barry Moore]] /  [[User:Carsonholt|Carson Holt]] || [http://www.yandell-lab.org Yandell Lab]<br>[[MAKER]]
+
| Day 1, PM || [http://weatherby.genetics.utah.edu/MAKER/wiki/index.php/MAKER_Tutorial_for_GMOD_Online_Training_2014 MAKER] ||  [[User:Bmoore|Barry Moore]] /  [[User:Carsonholt|Carson Holt]] || [http://www.yandell-lab.org Yandell Lab]<br>[[MAKER]]
 
|-
 
|-
 
| Day 2, AM || [[GMOD Online Training 2014/Chado Tutorial|Chado]] || [[User:Scott|Scott Cain]] || [http://oicr.on.ca/ Ontario Institute for Cancer Research]<br>GMOD Project Coordinator; [[Chado]], [[GBrowse]]
 
| Day 2, AM || [[GMOD Online Training 2014/Chado Tutorial|Chado]] || [[User:Scott|Scott Cain]] || [http://oicr.on.ca/ Ontario Institute for Cancer Research]<br>GMOD Project Coordinator; [[Chado]], [[GBrowse]]
 
|-
 
|-
| Day 2, PM || [[GMOD Online Training 2014/Tripal Tutorial|Tripal]] || [[User:sficklin|Stephen Ficklin]] || [http://www.wsu.edu Washington State University]<br>[[Tripal]]
+
| Day 2, PM || [[Tripal Tutorial v2.0|Tripal]] || [[User:sficklin|Stephen Ficklin]] || [http://www.wsu.edu Washington State University]<br>[[Tripal]]
 
|-
 
|-
 
| Day 3, AM || [[GMOD Online Training 2014/JBrowse Tutorial|JBrowse]] || [[User:Scott|Scott Cain]] || [http://oicr.on.ca/ Ontario Institute for Cancer Research]<br>GMOD Project Coordinator; [[Chado]], [[GBrowse]]
 
| Day 3, AM || [[GMOD Online Training 2014/JBrowse Tutorial|JBrowse]] || [[User:Scott|Scott Cain]] || [http://oicr.on.ca/ Ontario Institute for Cancer Research]<br>GMOD Project Coordinator; [[Chado]], [[GBrowse]]
Line 28: Line 28:
 
| Day 4, AM || [[GMOD Online Training 2014/GBrowse Tutorial|GBrowse]] || [[User:Scott|Scott Cain]] || [http://oicr.on.ca/ Ontario Institute for Cancer Research]<br>GMOD Project Coordinator; [[Chado]], [[GBrowse]]
 
| Day 4, AM || [[GMOD Online Training 2014/GBrowse Tutorial|GBrowse]] || [[User:Scott|Scott Cain]] || [http://oicr.on.ca/ Ontario Institute for Cancer Research]<br>GMOD Project Coordinator; [[Chado]], [[GBrowse]]
 
|-
 
|-
| Day 4, PM || [[GMOD Online Training 2014/GBrowse syn Tutorial|GBrowse syn]] || [[User:Mckays|Sheldon McKay]] || [http://iplantcollaborative.org iPlant Collaborative], [http://www.cshl.edu CSHL]<br>[[GBrowse_syn]], [[GBrowse]]
+
| Day 4, PM || [[GMOD Online Training 2014/GBrowse syn Tutorial|GBrowse syn]] || [[User:Mckays|Sheldon McKay]] || [http://oicr.on.ca/ Ontario Institute for Cancer Research], [http://www.reactome.org Reactome]<br>[[GBrowse_syn]], [[GBrowse]]
 
|-
 
|-
| Day 5, PM || [[GMOD Online Training 2014/Galaxy Tutorial|Galaxy]] || {{GalaxyWikiLink|CarlEberhard|Carl Eberhard}} || [http://galaxyproject.org/ Galaxy Project]<br>[[Galaxy]]
+
| Day 5, PM || [https://wiki.galaxyproject.org/Events/GMODSummerSchool2014 Galaxy] || {{GalaxyWikiLink|CarlEberhard|Carl Eberhard}} || [http://galaxyproject.org/ Galaxy Project]<br>[[Galaxy]]
 
|-
 
|-
 
| Day 5, AM || [[GMOD Online Training 2014/InterMine Tutorial|InterMine]] || Alex Kalderimis || [http://cam.ac.uk University of Cambridge, UK]<br>[[InterMine]]
 
| Day 5, AM || [[GMOD Online Training 2014/InterMine Tutorial|InterMine]] || Alex Kalderimis || [http://cam.ac.uk University of Cambridge, UK]<br>[[InterMine]]

Latest revision as of 07:42, 22 May 2014

Schedule

Classes start at 9am Eastern Daylight Time (UTC-4).

The course covers the following topics in detail:

Time slot Topic Instructor Affiliation; GMOD role
Day 1, AM GMOD in the Cloud, AWS walkthrough Scott Cain Ontario Institute for Cancer Research
GMOD Project Coordinator; Chado, GBrowse
Day 1, AM GFF3 Scott Cain Ontario Institute for Cancer Research
GMOD Project Coordinator; Chado, GBrowse
Day 1, AM/PM SOBA Barry Moore Sequence Ontology
Day 1, PM MAKER Barry Moore / Carson Holt Yandell Lab
MAKER
Day 2, AM Chado Scott Cain Ontario Institute for Cancer Research
GMOD Project Coordinator; Chado, GBrowse
Day 2, PM Tripal Stephen Ficklin Washington State University
Tripal
Day 3, AM JBrowse Scott Cain Ontario Institute for Cancer Research
GMOD Project Coordinator; Chado, GBrowse
Day 3, PM WebApollo Ed Lee Berkeley Bioinformatics Open-Source Projects
Apollo, WebApollo
Day 4, AM GBrowse Scott Cain Ontario Institute for Cancer Research
GMOD Project Coordinator; Chado, GBrowse
Day 4, PM GBrowse syn Sheldon McKay Ontario Institute for Cancer Research, Reactome
GBrowse_syn, GBrowse
Day 5, PM Galaxy Carl Eberhard Galaxy Project
Galaxy
Day 5, AM InterMine Alex Kalderimis University of Cambridge, UK
InterMine

Sponsors

GMOD thanks the generous grant from the Amazon AWS in Education program, which provided free compute time on Amazon Web Services for the course tutors and participants.