Difference between revisions of "GMOD News"
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== GMODWeb Needs Your Help! == | == GMODWeb Needs Your Help! == | ||
| − | '' | + | ''2007/11/21'' |
The [[GMODWeb]] component is currently in need of a champion and developer to support it. GMODWeb is a Perl tool that rides on top of [[Turnkey]] and generates a basic web site interface for a [[Chado]] database. | The [[GMODWeb]] component is currently in need of a champion and developer to support it. GMODWeb is a Perl tool that rides on top of [[Turnkey]] and generates a basic web site interface for a [[Chado]] database. | ||
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== November 2007 GMOD Meeting == | == November 2007 GMOD Meeting == | ||
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The [[November 2007 GMOD Meeting]] was attended by nearly 40 people from across the GMOD community. Community annotation and comparative genomics were two particularly hot topics at this meeting. See [[November 2007 GMOD Meeting]] for a list of presentations and a summary of the meeting. | The [[November 2007 GMOD Meeting]] was attended by nearly 40 people from across the GMOD community. Community annotation and comparative genomics were two particularly hot topics at this meeting. See [[November 2007 GMOD Meeting]] for a list of presentations and a summary of the meeting. | ||
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== Flybase Converts to Chado == | == Flybase Converts to Chado == | ||
| − | '' | + | ''2007/09/01'' |
This summer [http://flybase.org FlyBase] converted its schema to [[Chado]], the modular GMOD database schema. | This summer [http://flybase.org FlyBase] converted its schema to [[Chado]], the modular GMOD database schema. | ||
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== ISMB/Bioinformatics Chado Paper == | == ISMB/Bioinformatics Chado Paper == | ||
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Version 1.68 of [[GBrowse]] is a stability release which improves the documentation and installation process. It includes a new script called <tt>gbrowse_netinstall.pl</tt>, which will semi-automatically install GBrowse across the Internet on [[GBrowse Windows HOWTO|Windows]], [[GBrowse MacOSX HOWTO|Mac OSX]] and [[GBrowse Linux HOWTO|Linux]] platforms. | Version 1.68 of [[GBrowse]] is a stability release which improves the documentation and installation process. It includes a new script called <tt>gbrowse_netinstall.pl</tt>, which will semi-automatically install GBrowse across the Internet on [[GBrowse Windows HOWTO|Windows]], [[GBrowse MacOSX HOWTO|Mac OSX]] and [[GBrowse Linux HOWTO|Linux]] platforms. | ||
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| + | == News Archive == | ||
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| + | Earlier news items are available at [http://sourceforge.net/news/?group_id=27707 SourceForge]. | ||
Revision as of 21:34, 21 November 2007
News that is relevant to the GMOD user and developer communities.
This page includes news on a wide range of topics, from GMOD meetings and releases to user success stories and GMOD related publications.
If you have a news item you want added here, please send it to the GMOD Help Desk or add it to this page directly.
Contents
GMODWeb Needs Your Help!
2007/11/21
The GMODWeb component is currently in need of a champion and developer to support it. GMODWeb is a Perl tool that rides on top of Turnkey and generates a basic web site interface for a Chado database.
If you are interested please contact Scott Cain or Lincoln Stein.
November 2007 GMOD Meeting
2007/11/08
The November 2007 GMOD Meeting was attended by nearly 40 people from across the GMOD community. Community annotation and comparative genomics were two particularly hot topics at this meeting. See November 2007 GMOD Meeting for a list of presentations and a summary of the meeting.
Flybase Converts to Chado
2007/09/01
This summer FlyBase converted its schema to Chado, the modular GMOD database schema.
...
ISMB/Bioinformatics Chado Paper
2007/07/13
The paper 'A Chado case study: an ontology-based modular schema for representing genome-associated biological information' by Chris Mungall, Dave Emmert, and The FlyBase Consortium, was presented at ISMB/ECCB 2007, and is now available in the journal Bioinformatics.
The paper describes the overall Chado philosophy and the 5 core Chado modules.
GBrowse 1.68 Released
2007/04/17
Version 1.68 of GBrowse is a stability release which improves the documentation and installation process. It includes a new script called gbrowse_netinstall.pl, which will semi-automatically install GBrowse across the Internet on Windows, Mac OSX and Linux platforms.
News Archive
Earlier news items are available at SourceForge.
