GMOD Malaysia 2014/Intermine Tutorial
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Revision as of 18:07, 27 February 2014 by Alexkalderimis (Talk | contribs)
The Web Interface
This section focusses on the features of the graphical web interface.
All these tasks will look at FlyMine.
Search
The most basic search interface - the "quick-search" allows unstructured access to data in the system. Information is provided about what type of data is returned, to help narrow the search.
Tasks:
- How many hits are returned for "eve", "alzheimer"?
- Which fly genes match "alzheimer"?
Templates
Templates provide a more targeted search, which can be more powerful once you know what you are looking for.
Tasks:
- Find the templates section
- How many templates are good matches for "protein domain"?
- Can you find the protein domains for the gene "mad"?
- Can you find the protein domains for genes expressed in the Fly ovary? How many are there?