Frequent downloads
From GMOD
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- GMOD Core (Chado database and tools)
- gmod-core the schema and tools to install it. [From cvs]
- XORT a tool for loading and dumping chado-xml [Download]
- GMODTools a collection of tools for extracting data from a chado database and formatting it in common bulk download formats (GFF, Fasta, etc) [Included in schema cvs]
- MOD website
- gmod-web/Turnkey a generic web front end for browsing database contents.
- Genome Editing and Visualization
- Apollo a Java application for viewing and editing genome annotations [Download]
- GBrowse a CGI application for displaying genome annotations [Download]
- Pathway Tools
- Comparative Genomics
- Synbrowse a GBrowse based synteny viewer [Download]
- CMap a CGI application for displaying comparative maps [Download]
- Literature curation
- PubSearch a Java servlet web application for annotating genes from literature [Download]
- PubFetch a tool to facilitate literature collection for curators' use [Download]
- Textpresso a text mining system for scientific literature [Download]
- Database querying tools
- BioMart a query-oriented data management system [Download]
- Metabolic Pathways
- Pathway Tools
