Difference between revisions of "Downloads"

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=Download from Sourceforge=
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Many GMOD project file releases are available from
The complete set of GMOD project file releases is available from
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[http://sourceforge.net/project/showfiles.php?group_id=27707 Sourceforge GMOD].  Individual package releases include:
 
[http://sourceforge.net/project/showfiles.php?group_id=27707 Sourceforge GMOD].  Individual package releases include:
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=43774 Apollo]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=101505 blastGraphic]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=118263 Citrina]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=55129 CMap]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=161280 FlashGViewer]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=118262 GDS]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=34513 Generic Genome Browser (GBrowse)]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=19511 gmod (Chado)]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=102087 GOView]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=120452 LuceGene]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=40946 org.bdgp]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=167771 pg_dump (Postgres dumps of Chado databases)]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=126656 PubFetch]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=100560 PubSearch]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=96959 RestGraph]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=95524 seqdb_engine]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=64279 sop]
 
* [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=148718 XML-XORT (XORT)]
 
  
=GMOD Software Mirror=
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{| class="wikitable"
A mirror of the GMOD file releases is available at ftp://iubio.bio.indiana.edu/molbio/gmod/ or http://iubio.bio.indiana.edu/soft/molbio/gmod/ .
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! Component
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! Link
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|-
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| [[Apollo]]
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| {{:Apollo/tool_data | template = DownloadLink }}
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|-
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| [[BLAST Graphic Viewer]]
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| {{:BLAST Graphic Viewer/tool_data | template = DownloadLink }}
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|-
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| [[Chado]]
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| [http://sourceforge.net/projects/gmod/files/gmod/ Download]
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|-
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| [[CMap]]
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| {{:CMap/tool_data | template = DownloadLink }}
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|-
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| [[Flash GViewer]]
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| [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=161280 Download]
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|-
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| [[Galaxy]]
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| {{:Galaxy/tool_data | template = DownloadLink }}
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|-
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| [[GBrowse]] and [[GBrowse syn]]
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| {{:GBrowse/tool_data | template = DownloadLink }}
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|-
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| [[GO Graphic Viewer]]
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| {{:GO Graphic Viewer/tool_data | template = DownloadLink }}
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|-
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| [[JBrowse]]
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| {{:JBrowse/tool_data | template = DownloadLink }}
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|-
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| [[LuceGene]]
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| [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=120452 Download]
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|-
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| [[MAKER]]
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| {{:MAKER/tool_data | template = DownloadLink }}
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|-
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| [[Pathway Tools]]
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| {{:Pathway Tools/tool_data | template = DownloadLink }}
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|-
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| [[SOBA]]
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| {{:SOBA/tool_data | template = DownloadLink }}
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|-
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| [[Tripal]]
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| {{:Tripal/tool_data | template = DownloadLink }}
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|-
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| [[WebApollo]]
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| {{:WebApollo/tool_data | template = DownloadLink }}
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|-
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| [[XORT]]
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| [http://sourceforge.net/project/showfiles.php?group_id=27707&package_id=148718 Download]
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|}
  
=CVS=
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= SVN =
  
GMOD software for downloading and updating is described here: [[CVS Access]].
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GMOD uses the [[Subversion]] (SVN) source code control system to manage the source code for several of our components.  To get the latest and greatest versions of GMOD components, you'll often want to get the source files for them using [[SVN]].
[http://gmod.cvs.sourceforge.net/gmod/ Browsable CVS] lets you view and download individual, current project software files.
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See [[Subversion]] for how to download files from the {{SF_SVN||SVN repository at SourceForge}}.
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[[Category:GMOD Components]]

Latest revision as of 08:57, 9 April 2013

Many GMOD project file releases are available from Sourceforge GMOD. Individual package releases include:

Component Link
Apollo

Download

BLAST Graphic Viewer

Download

Chado Download
CMap

Download

Flash GViewer Download
Galaxy

Download

GBrowse and GBrowse syn

Download

GO Graphic Viewer

Download

JBrowse

Download

LuceGene Download
MAKER

Download

Pathway Tools


Download

SOBA

See SOBA for details

Tripal


Download

WebApollo

Download

XORT Download

SVN

GMOD uses the Subversion (SVN) source code control system to manage the source code for several of our components. To get the latest and greatest versions of GMOD components, you'll often want to get the source files for them using SVN.

See Subversion for how to download files from the SVN repository at SourceForge.