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DBStag is a generic SQL to XML mapping tool



Loading data

The most common use in the context of Chado is to load Chado XML. No configuration is necessary, just install and run -d Pg:mychadoinst@myserver gene_ontology.chado


A secondary use is a means of data retrieval. DBStag can be used to query Chado using multi-table joins with the results automatically nested.

Chado comes with some templates that can be used with Stag.

Example: -d Pg:mychadoinst@myserver /chado-cvterm dbname=GO accession=0008150