Difference between revisions of "Canto"
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|install=Full instructions for installing Canto are available on the [https://github.com/pombase/canto Canto github page]. | |install=Full instructions for installing Canto are available on the [https://github.com/pombase/canto Canto github page]. | ||
|doc=Instructions for using Canto are integrated into the tool installations and at the [http://curation.pombase.org/pombe/docs/index/ PomBase Canto site]. | |doc=Instructions for using Canto are integrated into the tool installations and at the [http://curation.pombase.org/pombe/docs/index/ PomBase Canto site]. | ||
− | |dev ppl=Canto is developed as part of the [http://pombase.org PomBase project], which provides a model | + | |dev ppl=Canto is developed as part of the [http://pombase.org PomBase project], which provides a model organism database for the fission yeast ''Schizosaccharomyces pombe''. PomBase is funded by the [http://www.wellcome.ac.uk/ Wellcome Trust] and is |
− | organism database for the fission yeast | + | run by a consortium comprising the [http://www.cam.ac.uk/ University of Cambridge], the [http://www.ebi.ac.uk/ European |
− | ''Schizosaccharomyces pombe''. PomBase is | + | |
− | funded by the [http://www.wellcome.ac.uk/ Wellcome Trust] and is | + | |
− | run by a consortium comprising the [http://www.cam.ac.uk/ University | + | |
− | of Cambridge], the [http://www.ebi.ac.uk/ European | + | |
Bioinformatics Institute] and [http://www.ucl.ac.uk/ University College London]. | Bioinformatics Institute] and [http://www.ucl.ac.uk/ University College London]. | ||
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Revision as of 23:06, 26 November 2013
- Mature release
- Development: active
- Support: active
Contents
About Canto
Canto is an online annotation tool which has been developed to allow researchers to curate the genetic and molecular data from their publications for inclusion in public biological databases. Originally created for the fission yeast community, Canto is a generic tool that can be readily configured for use with other organisms and other databases.
Visit the Canto website.
Downloads
Using Canto
Installation
Full instructions for installing Canto are available on the Canto github page.
Documentation
Instructions for using Canto are integrated into the tool installations and at the PomBase Canto site.
Contacts and Mailing Lists
Please email the PomBase helpdesk with any questions or problems.
Canto in the wild
Public installations of Canto:-
Generic Gene Ontology Canto
- Curate GO annotations for proteins using UniProtKB identifiers
-
PomBase Canto
- Curate GO annotations for S. pombe
Canto Development
Development team
Canto is developed as part of the PomBase project, which provides a model organism database for the fission yeast Schizosaccharomyces pombe. PomBase is funded by the Wellcome Trust and is run by a consortium comprising the University of Cambridge, the [http://www.ebi.ac.uk/ European Bioinformatics Institute] and University College London.
More on Canto
Available on platform | linux +, unix + and web + |
Has URL | http://curation.pombase.org/ +, http://curation.pombase.org/demo +, https://github.com/pombase/canto +, http://curation.pombase.org/pombe/docs/index/ + and http://curation.pombase.org/uniprot + |
Has description | Canto is an online annotation tool which h … Canto is an online annotation tool which has been developed to allow researchers to curate the genetic and molecular data from their publications for inclusion in public biological databases. Originally created for the fission yeast community, Canto is a generic tool that can be readily configured for use with other organisms and other databases. with other organisms and other databases. + and Curate GO annotations for proteins using UniProtKB identifiers + |
Has development status | active + |
Has licence | GPL3 + |
Has logo | CantoLogo.png + |
Has software maturity status | mature + |
Has support status | active + |
Has title | Generic Gene Ontology Canto + |
Has topic | Canto + |
Interaction type | can save data in + |
Interactor | Canto + |
Interacts with | Chado + |
Is open source | Yes + |
Link type | website +, demo server +, download +, documentation + and wild URL + |
Release date | 1 November 2013 + |
Tool functionality or classification | literature curation + |
Written in language | Perl + |
Has subobjectThis property is a special property in this wiki. | Canto#http://curation.pombase.org/ +, Canto#http://curation.pombase.org/demo +, Canto#https://github.com/pombase/canto +, Canto#http://curation.pombase.org/pombe/docs/index/ +, Canto#http://curation.pombase.org/uniprot + and Canto + |