Difference between revisions of "BA2009"

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== Sponsor ==
 
== Sponsor ==
  
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{{ImageLeft|BioplatformsAustraliaLogo.jpg|Bioplatforms Australia||http://www.bioplatforms.com/}}
 
This workshop is generously sponsored by [http://www.bioplatforms.com/ Bioplatforms Australia], and admission to the workshop is included in the registration for [http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009 Bioinformatics Australia 2009].
 
This workshop is generously sponsored by [http://www.bioplatforms.com/ Bioplatforms Australia], and admission to the workshop is included in the registration for [http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009 Bioinformatics Australia 2009].

Revision as of 17:29, 30 September 2009

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Bioinformatics Australia 2009|450|http://www.ausbiotech2009.com.au/bia/bioinformaticsaustralia2009}}

Pre-Conference GMOD Workshop
28 October 2009, 2:00-6:00pm


There will be a half day, pre-conference GMOD workshop at Bioinformatics Australia 2009 (BA2009) in Melbourne. The workshop will be held Wednesday 28 October 2009, from 2-6pm.

The workshop will introduce the GMOD project and many project components. The workshop will be run by Dave Clements of the GMOD Help Desk.


Tentative Agenda

This agenda will be expanded in the coming weeks.

Time Topic
2:00 Introduction
2:10 Software
2:15 Visualisation

GBrowse, JBrowse, GBrowse_syn, CMap, other Comparative Genomics viewers
This will include a detailed GBrowse configuration example, including showing some next generation sequence data.

3:55 Break
4:05 Data Management

Chado, BioMart, InterMine, GFF3

4:50 Annotation

MAKER, DIYA, Apollo, Textpresso, Community Annotation, Pipelines and Workflows

5:35 GMOD Project and Community

http://www.bioplatforms.com/

This workshop is generously sponsored by Bioplatforms Australia, and admission to the workshop is included in the registration for Bioinformatics Australia 2009.