Difference between revisions of "Apollo-Chado example database"
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The cvs repository that has the sample databases in it is called 'sample_dbs' and can be checked out either anonymously or as a GMOD developer following the directions on the [[CVS_Access]] page. The repository is quite large (200MB) so it will take a while to download. | The cvs repository that has the sample databases in it is called 'sample_dbs' and can be checked out either anonymously or as a GMOD developer following the directions on the [[CVS_Access]] page. The repository is quite large (200MB) so it will take a while to download. | ||
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Revision as of 18:08, 28 December 2007
There is an example database with GFF3 source files, a log of the commands used to build the database, database dumps at a few steps of building the database, and an Apollo chado-adaptor.xml config file in the schema CVS. From the README:
The sample database that used to be in this directory has been moved to its own cvs repository in the gmod cvs, in a repository called 'sample_dbs'. Scott Cain 1/9/07
Getting the sample databases from cvs
The cvs repository that has the sample databases in it is called 'sample_dbs' and can be checked out either anonymously or as a GMOD developer following the directions on the CVS_Access page. The repository is quite large (200MB) so it will take a while to download.