Difference between revisions of "Apollo-Chado example database"

From GMOD
Jump to: navigation, search
m
Line 11: Line 11:
  
 
The cvs repository that has the sample databases in it is called 'sample_dbs' and can be checked out either anonymously or as a GMOD developer following the directions on the [[CVS_Access]] page.  The repository is quite large (200MB) so it will take a while to download.
 
The cvs repository that has the sample databases in it is called 'sample_dbs' and can be checked out either anonymously or as a GMOD developer following the directions on the [[CVS_Access]] page.  The repository is quite large (200MB) so it will take a while to download.
 +
 +
[[Category:Apollo]]
 +
[[Category:Chado]]

Revision as of 18:08, 28 December 2007

There is an example database with GFF3 source files, a log of the commands used to build the database, database dumps at a few steps of building the database, and an Apollo chado-adaptor.xml config file in the schema CVS. From the README:


The sample database that used to be in this directory has been moved to its
own cvs repository in the gmod cvs, in a repository called 'sample_dbs'.

Scott Cain
1/9/07

Getting the sample databases from cvs

The cvs repository that has the sample databases in it is called 'sample_dbs' and can be checked out either anonymously or as a GMOD developer following the directions on the CVS_Access page. The repository is quite large (200MB) so it will take a while to download.