Difference between revisions of "Apollo"
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The Apollo genome editor is a Java-based application for browsing and annotating genomic sequences. There are currently two branches of Apollo, one primarily used for genome browsing and maintained at [http://www.ensembl.org Ensembl], and the other primarily used for genome annotation and maintained at the [http://www.fruitfly.org Berkeley Drosophila Genome Center]. The latter is part of the GMOD project. | The Apollo genome editor is a Java-based application for browsing and annotating genomic sequences. There are currently two branches of Apollo, one primarily used for genome browsing and maintained at [http://www.ensembl.org Ensembl], and the other primarily used for genome annotation and maintained at the [http://www.fruitfly.org Berkeley Drosophila Genome Center]. The latter is part of the GMOD project. | ||
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[http://fruitfly.org/annot/apollo Apollo Homepage] | [http://fruitfly.org/annot/apollo Apollo Homepage] | ||
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See [http://www.fruitfly.org/annot/apollo/images/mainwindow.jpg this screenshot]. | See [http://www.fruitfly.org/annot/apollo/images/mainwindow.jpg this screenshot]. | ||
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==Requirements== | ==Requirements== | ||
JDK 1.4 or higher. | JDK 1.4 or higher. | ||
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==Documentation== | ==Documentation== | ||
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* [http://fruitfly.org/annot/apollo/javadoc Apollo Javadocs] | * [http://fruitfly.org/annot/apollo/javadoc Apollo Javadocs] | ||
* [http://sourceforge.net/tracker/?atid=462763&group_id=27707&func=browse Apollo bug tracker at Sourceforge] | * [http://sourceforge.net/tracker/?atid=462763&group_id=27707&func=browse Apollo bug tracker at Sourceforge] | ||
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==Contact== | ==Contact== | ||
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* [[Suzanna Lewis]] | * [[Suzanna Lewis]] | ||
* The [http://mail.fruitfly.org/mailman/listinfo/apollo Apollo mailing list] | * The [http://mail.fruitfly.org/mailman/listinfo/apollo Apollo mailing list] | ||
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==Downloads== | ==Downloads== | ||
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[http://sourceforge.net/project/showfiles.php?group_id=27707 From SourceForge.] | [http://sourceforge.net/project/showfiles.php?group_id=27707 From SourceForge.] | ||
| + | ==Users== | ||
| + | |||
| + | Off the top of the heads of the attendees of the [[November 2007 GMOD Meeting]]. Sorted by version. | ||
| + | * Triggers | ||
| + | ** VMWare | ||
| + | ** Dolan-Rice | ||
| + | * Crabtree | ||
| + | ** Paramecium | ||
| + | ** INRA | ||
| + | ** UCSF (Smith) | ||
| + | * cXML | ||
| + | ** FlyBase | ||
| + | ** BovineBase | ||
| + | ** VectorBase | ||
[[Category:GMOD Components]] | [[Category:GMOD Components]] | ||
Revision as of 21:06, 6 November 2007
Contents
Description
Apollo Genome Editor
The Apollo genome editor is a Java-based application for browsing and annotating genomic sequences. There are currently two branches of Apollo, one primarily used for genome browsing and maintained at Ensembl, and the other primarily used for genome annotation and maintained at the Berkeley Drosophila Genome Center. The latter is part of the GMOD project.
Demo & Screenshots
See this screenshot.
Requirements
JDK 1.4 or higher.
Documentation
Contact
Downloads
Users
Off the top of the heads of the attendees of the November 2007 GMOD Meeting. Sorted by version.
- Triggers
- VMWare
- Dolan-Rice
- Crabtree
- Paramecium
- INRA
- UCSF (Smith)
- cXML
- FlyBase
- BovineBase
- VectorBase
